myRT

myRT report for GCA_012027105.1_ASM1202710v1

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Seq: SGXY01000001.1 Klebsiella pneumoniae strain KPN925 925_contig_1, whole genome shotgun sequence (5369993 bp)
Overview 1 RT 1: 1642715-1646823 bp 2 RT 2: 2926293-2928993 bp 3 RT 3: 3055064-3059945 bp 4 RT 4: 4111005-4117858 bp Neighborhood of RT #1 [1642715, 1646825] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [2926293, 2928993] RVT-GII Neighborhood of RT #3 [3055064, 3059950] YccC PRK10016 RVT-GII dacD Neighborhood of RT #4 [4111005, 4117875] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 1642715-1642957 bp Feature: domain Description: DinI Location: 1642766-1642946 bp Feature: domain Description: DinI Location: 1 642766-1 642946 bp Feature: gene Location: 1642972-1643118 bp Feature: gene Location: 1643572-1645059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643977-1644667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 643977-1 644667 bp Feature: gene Location: 1645138-1645557 bp Feature: domain Description: PRK10276 Location: 1645141-1645552 bp Feature: domain Description: PRK1 0276 Location: 1 6451 41 -1 645552 bp Feature: gene Location: 1645560-1646825 bp Feature: domain Description: umuC Location: 1645563-1646823 bp Feature: domain Description: umuC Location: 1 645563-1 646823 bp Feature: gene Location: 2926293-2926559 bp Feature: gene Location: 2926571-2926810 bp Feature: gene Location: 2926888-2928372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927290-2927980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927290-2927980 bp Feature: gene Location: 2928381-2928548 bp Feature: gene Location: 2928778-2928993 bp Feature: gene Location: 3055064-3056122 bp Feature: domain Description: YccC Location: 3055070-3056108 bp Feature: domain Description: YccC Location: 3055070-30561 08 bp Feature: gene Location: 3056221-3056694 bp Feature: domain Description: PRK10016 Location: 3056224-3056683 bp Feature: domain Description: PRK1 001 6 Location: 3056224-3056683 bp Feature: gene Location: 3056776-3058260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057178-3057868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30571 78-3057868 bp Feature: gene Location: 3058269-3058436 bp Feature: gene Location: 3058781-3059950 bp Feature: domain Description: dacD Location: 3058790-3059945 bp Feature: domain Description: dacD Location: 3058790-3059945 bp Feature: gene Location: 4111005-4111670 bp Feature: domain Description: INT_P4_C Location: 4111110-4111668 bp Feature: domain Description: INT_P4_C Location: 41 1 1 1 1 0-41 1 1 668 bp Feature: gene Location: 4111931-4112371 bp Feature: domain Description: Integrase_1 Location: 4111937-4112153 bp Feature: domain Description: Integrase_1 Location: 41 1 1 937-41 1 21 53 bp Feature: gene Location: 4112428-4114506 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4112836-4113280 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41 1 2836-41 1 3280 bp Feature: gene Location: 4114506-4117115 bp Feature: domain Description: FimD Location: 4114563-4117104 bp Feature: domain Description: FimD Location: 41 1 4563-41 1 71 04 bp Feature: gene Location: 4117147-4117875 bp Feature: domain Description: FimC Location: 4117195-4117858 bp Feature: domain Description: FimC Location: 41 1 71 95-41 1 7858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4
FimD (COG3188), FimC (COG3121)

Seq: SGXY01000003.1 Klebsiella pneumoniae strain KPN925 925_contig_3, whole genome shotgun sequence (247909 bp)
Overview 1 RT 1: 130624-133872 bp Neighborhood of RT #1 [130624, 133886] RVT-GII PRK10276 Feature: gene Location: 130624-130845 bp Feature: gene Location: 131107-131337 bp Feature: gene Location: 131571-133058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131976-132666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131976-132 666 bp Feature: gene Location: 133064-133231 bp Feature: gene Location: 133461-133886 bp Feature: domain Description: PRK10276 Location: 133464-133872 bp Feature: domain Description: PRK102 76 Location: 133464-133872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)