myRT

myRT report for GCA_012030855.1_ASM1203085v1

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Seq: JAAUVE010000514.1 Microcoleus sp. SU_5_6 NODE_3574_length_4696_cov_5.469906, whole genome shotgun sequence (4696 bp)
Overview 1 RT 1: 1-3229 bp Neighborhood of RT #1 [1, 3229] Cas_Cas1 RVT-CRISPR ThiF_MoeB_HesA_family Feature: gene Location: 1-633 bp Feature: domain Description: Cas_Cas1 Location: 13-634 bp Feature: domain Description: Cas_Cas1 Location: 1 3-634 bp Feature: gene Location: 680-1723 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 935-1541 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 935-1 541 bp Feature: gene Location: 1993-3087 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 2287-2692 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 2287-2692 bp Feature: gene Location: 3023-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), RVT-CRISPR, ThiF_MoeB_HesA_family (cd00757)

Seq: JAAUVE010000568.1 Microcoleus sp. SU_5_6 NODE_4105_length_4226_cov_1.789217, whole genome shotgun sequence (4226 bp)
Overview 1 RT 1: 1292-4170 bp Neighborhood of RT #1 [1292, 4175] Rnc Rnc RVT-Retrons CE4_DAC_u1_6s CE4_NodB_like_5s_6s Feature: gene Location: 1292-1468 bp Feature: domain Description: Rnc Location: 1310-1454 bp Feature: domain Description: Rnc Location: 1310-1454 bp Feature: gene Location: 1489-1974 bp Feature: domain Description: Rnc Location: 1492-1963 bp Feature: domain Description: Rnc Location: 1492 -1963 bp Feature: gene Location: 2093-3310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2639-3257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 639-32 57 bp Feature: gene Location: 3550-3807 bp Feature: domain Description: CE4_DAC_u1_6s Location: 3562-3778 bp Feature: domain Description: CE4_DAC_u1_6s Location: 3562 -3778 bp Feature: gene Location: 3816-4175 bp Feature: domain Description: CE4_NodB_like_5s_6s Location: 3879-4170 bp Feature: domain Description: CE4_NodB_like_5s_6s Location: 3879-4170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnc (COG0571), RVT-Retrons, CE4_DAC_u1_6s (cd10970), CE4_NodB_like_5s_6s (cd10918)

Seq: JAAUVE010000079.1 Microcoleus sp. SU_5_6 NODE_587_length_16831_cov_2.868175, whole genome shotgun sequence (16831 bp)
Overview 1 RT 1: 13084-16484 bp Neighborhood of RT #1 [13084, 16576] Avd_like RVT-DGRs YjgR Feature: gene Location: 13084-13395 bp Feature: gene Location: 13438-13734 bp Feature: domain Description: Avd_like Location: 13444-13711 bp Feature: domain Description: Avd_like Location: 13 444-13 711 bp Feature: gene Location: 13753-14799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13963-14602 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13 963 -14602 bp Feature: gene Location: 14834-16576 bp Feature: domain Description: YjgR Location: 14939-16484 bp Feature: domain Description: YjgR Location: 1493 9-16484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YjgR (COG0433)