myRT

myRT report for GCA_012030915.1_ASM1203091v1

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Seq: JAAUUY010000170.1 Leptolyngbyaceae cyanobacterium SU_3_3 NODE_2958_length_5408_cov_1.508616, whole genome shotgun sequence (5408 bp)
Overview 1 RT 1: 2241-5144 bp Neighborhood of RT #1 [2241, 5179] Cas_Cas02710 RVT-CRISPR Cas_Cas1 Cas1_I-II-III Feature: gene Location: 2241-2852 bp Feature: gene Location: 2809-3069 bp Feature: domain Description: Cas_Cas02710 Location: 2839-2998 bp Feature: domain Description: Cas_Cas0271 0 Location: 2839-2998 bp Feature: gene Location: 3073-3774 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3298-3769 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3298-3769 bp Feature: gene Location: 3837-4823 bp Feature: domain Description: Cas_Cas1 Location: 4179-4809 bp Feature: domain Description: Cas_Cas1 Location: 41 79-4809 bp Feature: gene Location: 4850-5179 bp Feature: domain Description: Cas1_I-II-III Location: 4862-5144 bp Feature: domain Description: Cas1 _I-II-III Location: 4862-51 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas02710 (pfam09670), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas1_I-II-III (cl00656)

Seq: JAAUUY010000350.1 Leptolyngbyaceae cyanobacterium SU_3_3 NODE_4334_length_4043_cov_1.203269, whole genome shotgun sequence (4043 bp)
Overview 1 RT 1: 3161-4037 bp Neighborhood of RT #1 [3161, 4042] Peptidase_M23 RVT-GII Feature: gene Location: 3161-3325 bp Feature: gene Location: 3345-3608 bp Feature: domain Description: Peptidase_M23 Location: 3396-3522 bp Feature: domain Description: Peptidase_M2 3 Location: 3396-352 2 bp Feature: gene Location: 3851-4042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3857-4037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3857-4037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M23 (pfam01551), RVT-GII