myRT

myRT report for GCA_012031145.1_ASM1203114v1

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Seq: JAAUUH010000154.1 Oscillatoriales cyanobacterium SM2_2_1 NODE_4712_length_5063_cov_3.098460, whole genome shotgun sequence (5063 bp)
Overview 1 RT 1: 408-5034 bp Neighborhood of RT #1 [408, 5060] integrase_gron KOG4768 RVT-UG21 DUF3122 GIDE Feature: gene Location: 408-1391 bp Feature: domain Description: integrase_gron Location: 438-1356 bp Feature: domain Description: integrase_gron Location: 438-1 356 bp Feature: gene Location: 1473-1622 bp Feature: gene Location: 2029-3615 bp Feature: domain Description: KOG4768 Location: 2161-2341 bp Feature: domain Description: KOG4768 Location: 21 61 -2341 bp Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 2437-2857 bp Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 2437-2857 bp Feature: gene Location: 3899-4378 bp Feature: domain Description: DUF3122 Location: 3968-4346 bp Feature: domain Description: DUF31 22 Location: 3968-4346 bp Feature: gene Location: 4533-5060 bp Feature: domain Description: GIDE Location: 4722-5034 bp Feature: domain Description: GIDE Location: 4722-5034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT integrase_gron (TIGR02249), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-UG21, DUF3122 (pfam11320), GIDE (pfam12483)

Seq: JAAUUH010000063.1 Oscillatoriales cyanobacterium SM2_2_1 NODE_951_length_16871_cov_10.600096, whole genome shotgun sequence (16871 bp)
Overview 1 RT 1: 8672-13780 bp Neighborhood of RT #1 [8672, 15657] RVT-Retrons ResIII SSL2 Feature: gene Location: 8672-8845 bp Feature: gene Location: 9029-9661 bp Feature: gene Location: 9955-11712 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10090-10735 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10090-10735 bp Feature: gene Location: 11703-12020 bp Feature: gene Location: 12115-15657 bp Feature: domain Description: ResIII Location: 12421-13138 bp Feature: domain Description: ResIII Location: 12 42 1-13138 bp Feature: domain Description: SSL2 Location: 13594-13780 bp Feature: domain Description: SSL2 Location: 13594-13780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ResIII (pfam04851), SSL2 (COG1061)