myRT

myRT report for GCA_012031785.1_ASM1203178v1

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Seq: JAAUTG010000185.1 Saprospiraceae bacterium isolate SM1_3_1 NODE_3186_length_9602_cov_2.448232, whole genome shotgun sequence (9602 bp)
Overview 1 RT 1: 3407-8364 bp Neighborhood of RT #1 [3407, 8513] HigB HigA RVT-GII GIIM COG3177 PDDEXK_2 Feature: gene Location: 3407-3700 bp Feature: domain Description: HigB Location: 3410-3698 bp Feature: domain Description: HigB Location: 341 0-3698 bp Feature: gene Location: 3706-4002 bp Feature: domain Description: HigA Location: 3712-3997 bp Feature: domain Description: HigA Location: 371 2-3997 bp Feature: gene Location: 4157-5458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4412-5081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 2-5081 bp Feature: domain Description: GIIM Note: maturase Location: 5180-5384 bp Feature: domain Description: GIIM Note: maturase Location: 51 80-5384 bp Feature: gene Location: 6356-7426 bp Feature: domain Description: COG3177 Location: 6380-7388 bp Feature: domain Description: COG31 77 Location: 6380-7388 bp Feature: gene Location: 7641-8513 bp Feature: domain Description: PDDEXK_2 Location: 7674-8364 bp Feature: domain Description: PDDEXK_2 Location: 7674-8364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB (COG4680), HigA (COG5499), RVT-GII, GIIM (pfam08388), COG3177 (Fic family protein ), PDDEXK_2 (pfam12784)

Seq: JAAUTG010000311.1 Saprospiraceae bacterium isolate SM1_3_1 NODE_6843_length_5583_cov_1.190799, whole genome shotgun sequence (5583 bp)
Overview 1 RT 1: 2032-4960 bp Neighborhood of RT #1 [2032, 4983] Avd_like RVT-DGRs RVT-DGRs Uma2 Feature: gene Location: 2032-2268 bp Feature: gene Location: 2355-2696 bp Feature: domain Description: Avd_like Location: 2376-2685 bp Feature: domain Description: Avd_like Location: 2 376-2 685 bp Feature: gene Location: 2698-3072 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2908-3004 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 908-3004 bp Feature: gene Location: 3179-3763 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3182-3545 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3182 -3545 bp Feature: gene Location: 3779-4120 bp Feature: gene Location: 4429-4983 bp Feature: domain Description: Uma2 Location: 4513-4960 bp Feature: domain Description: Uma2 Location: 4513-4960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Uma2 (pfam05685)