myRT

myRT report for GCA_012031815.1_ASM1203181v1

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Seq: JAAUTE010000311.1 Chloroflexaceae bacterium isolate SM1_2_4 NODE_10483_length_4074_cov_1.449455, whole genome shotgun sequence (4074 bp)
Overview 1 RT 1: 552-3528 bp Neighborhood of RT #1 [552, 3932] RVT-DGRs Avd_like YfmG Feature: gene Location: 552-1034 bp Feature: gene Location: 1034-1243 bp Feature: gene Location: 1720-2814 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1957-2590 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 957-2590 bp Feature: gene Location: 2787-3125 bp Feature: domain Description: Avd_like Location: 2805-3114 bp Feature: domain Description: Avd_like Location: 2805-31 1 4 bp Feature: gene Location: 3264-3932 bp Feature: domain Description: YfmG Location: 3276-3528 bp Feature: domain Description: YfmG Location: 3276-3528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: JAAUTE010000034.1 Chloroflexaceae bacterium isolate SM1_2_4 NODE_748_length_21509_cov_2.570760, whole genome shotgun sequence (21509 bp)
Overview 1 RT 1: 5478-10660 bp Neighborhood of RT #1 [5478, 10704] abortive_AbiA RVT-UNC HAS-barrel YjgR ybiA Feature: gene Location: 5478-5720 bp Feature: gene Location: 5769-6689 bp Feature: domain Description: abortive_AbiA Location: 6333-6654 bp Feature: domain Description: abortive_AbiA Location: 6333-6654 bp Feature: gene Location: 6686-7423 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6917-7391 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6917-7391 bp Feature: gene Location: 8549-10264 bp Feature: domain Description: HAS-barrel Location: 8573-8822 bp Feature: domain Description: HAS-barrel Location: 8573-882 2 bp Feature: domain Description: YjgR Location: 8945-10196 bp Feature: domain Description: YjgR Location: 8945-10196 bp Feature: gene Location: 10369-10704 bp Feature: domain Description: ybiA Location: 10375-10660 bp Feature: domain Description: ybiA Location: 10375-10660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT abortive_AbiA (TIGR04499), RVT-UG17/RVT-Retrons/RVT-DGRs/RVT-GII(RVT-UNC), HAS-barrel (pfam09378), YjgR (COG0433), ybiA (COG3236)