myRT

myRT report for GCA_012032075.1_ASM1203207v1

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Seq: JAAURU010000304.1 Flavobacterium sp. isolate RU_4_13 NODE_10331_length_4742_cov_6.228386, whole genome shotgun sequence (4742 bp)
Overview 1 RT 1: 2239-4445 bp Neighborhood of RT #1 [2239, 4483] petB RVT-GII Feature: gene Location: 2239-2481 bp Feature: domain Description: petB Location: 2302-2479 bp Feature: domain Description: petB Location: 2302-2479 bp Feature: gene Location: 2673-3230 bp Feature: gene Location: 3980-4483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4211-4445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 1 -4445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT petB (CHL00070), RVT-GII

Seq: JAAURU010000288.1 Flavobacterium sp. isolate RU_4_13 NODE_9315_length_5089_cov_1.592705, whole genome shotgun sequence (5089 bp)
Overview 1 RT 1: 531-4471 bp Neighborhood of RT #1 [531, 4506] Por_Secre_tail Dcm RVT-GII GIIM OMP_b-brl Feature: gene Location: 531-1376 bp Feature: domain Description: Por_Secre_tail Location: 1257-1362 bp Feature: domain Description: Por_Secre_tail Location: 12 57-1362 bp Feature: gene Location: 1582-2058 bp Feature: domain Description: Dcm Location: 1891-2032 bp Feature: domain Description: Dcm Location: 1891-2 032 bp Feature: gene Location: 2244-3491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2463-3126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 463-312 6 bp Feature: domain Description: GIIM Note: maturase Location: 3240-3414 bp Feature: domain Description: GIIM Note: maturase Location: 32 40-3414 bp Feature: gene Location: 3642-3830 bp Feature: gene Location: 4006-4506 bp Feature: domain Description: OMP_b-brl Location: 4027-4471 bp Feature: domain Description: OMP_b-brl Location: 402 7-4471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-GII, GIIM (pfam08388), OMP_b-brl (pfam13505), Por_Secre_tail (TIGR04183)