myRT

myRT report for GCA_012032135.1_ASM1203213v1

Download annotations/find similar RTs

Seq: JAAURS010000135.1 Acaryochloridaceae cyanobacterium RU_4_10 NODE_2917_length_11435_cov_2.536434, whole genome shotgun sequence (11435 bp)
Overview 1 RT 1: 7401-11106 bp Neighborhood of RT #1 [7401, 11120] Csm6_III-A SAVED RVT-CRISPR RVT-CRISPR Cas_Cas1 Cas_Cas1 Feature: gene Location: 7401-8507 bp Feature: domain Description: Csm6_III-A Location: 7530-8034 bp Feature: domain Description: Csm6_III-A Location: 7530-8034 bp Feature: gene Location: 8649-9179 bp Feature: domain Description: SAVED Location: 8841-9135 bp Feature: domain Description: SAVED Location: 8841 -91 35 bp Feature: gene Location: 9185-9769 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9392-9677 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9392-9677 bp Feature: gene Location: 9781-10029 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9784-9997 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9784-9997 bp Feature: gene Location: 10019-10882 bp Feature: domain Description: Cas_Cas1 Location: 10280-10811 bp Feature: domain Description: Cas_Cas1 Location: 1 0280-1 081 1 bp Feature: gene Location: 10872-11120 bp Feature: domain Description: Cas_Cas1 Location: 10875-11106 bp Feature: domain Description: Cas_Cas1 Location: 1 0875-1 1 1 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm6_III-A (cl19028), SAVED (pfam18145), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: JAAURS010000174.1 Acaryochloridaceae cyanobacterium RU_4_10 NODE_3758_length_9756_cov_2.717728, whole genome shotgun sequence (9756 bp)
Overview 1 RT 1: 7630-9504 bp Neighborhood of RT #1 [7630, 9704] RVT-UG19 Feature: gene Location: 7630-7839 bp Feature: gene Location: 8112-9116 bp Feature: gene Location: 9123-9704 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 9165-9504 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 9165-9504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19

Seq: JAAURS010000007.1 Acaryochloridaceae cyanobacterium RU_4_10 NODE_435_length_33238_cov_2.769774, whole genome shotgun sequence (33238 bp)
Overview 1 RT 1: 22169-26254 bp Neighborhood of RT #1 [22169, 26254] vWA_subgroup RVT-Retrons Feature: gene Location: 22169-24010 bp Feature: domain Description: vWA_subgroup Location: 22289-22796 bp Feature: domain Description: vWA_subgroup Location: 22289-22796 bp Feature: gene Location: 24310-24891 bp Feature: gene Location: 24910-25521 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24928-25504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24928-25504 bp Feature: gene Location: 25527-25763 bp Feature: gene Location: 25928-26254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT vWA_subgroup (cd01465), RVT-Retrons