myRT

myRT report for GCA_012032145.1_ASM1203214v1

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Seq: JAAURR010000103.1 Acaryochloris sp. RU_4_1 NODE_1926_length_14869_cov_16.438272, whole genome shotgun sequence (14869 bp)
Overview 1 RT 1: 248-5602 bp Neighborhood of RT #1 [248, 5661] RVT_N RVT-GII GIIM HNH FhaB Feature: gene Location: 248-460 bp Feature: gene Location: 752-1054 bp Feature: gene Location: 1086-2771 bp Feature: domain Description: RVT_N Location: 1140-1380 bp Feature: domain Description: RVT_N Location: 1 1 40-1 380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1434-2076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 434-2076 bp Feature: domain Description: GIIM Note: maturase Location: 2136-2364 bp Feature: domain Description: GIIM Note: maturase Location: 21 36-2364 bp Feature: domain Description: HNH Note: nucleases Location: 2616-2754 bp Feature: domain Description: HNH Note: nucleases Location: 261 6-2754 bp Feature: gene Location: 2831-3202 bp Feature: gene Location: 3253-5661 bp Feature: domain Description: FhaB Location: 3262-5602 bp Feature: domain Description: FhaB Location: 3262-5602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), FhaB (COG3210)

Seq: JAAURR010000121.1 Acaryochloris sp. RU_4_1 NODE_2541_length_12492_cov_26.697938, whole genome shotgun sequence (12492 bp)
Overview 1 RT 1: 2-4592 bp Neighborhood of RT #1 [2, 4592] RVT-CRISPR Cas_Cas1 Csx1_III-U Feature: gene Location: 2-1930 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 209-815 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 09-815 bp Feature: domain Description: Cas_Cas1 Location: 1097-1928 bp Feature: domain Description: Cas_Cas1 Location: 1097-192 8 bp Feature: gene Location: 1935-2789 bp Feature: domain Description: Csx1_III-U Location: 2475-2709 bp Feature: domain Description: Csx1_III-U Location: 2 475-2 709 bp Feature: gene Location: 4416-4592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Csx1_III-U (cl21570)