myRT

myRT report for GCA_012032315.1_ASM1203231v1

Download annotations/find similar RTs

Seq: JAAURH010000215.1 Verrucomicrobiae bacterium isolate RM2_3_1 NODE_3593_length_3634_cov_2.405760, whole genome shotgun sequence (3634 bp)
Overview 1 RT 1: 2-3241 bp Neighborhood of RT #1 [2, 3241] RVT-GII GIIM Feature: gene Location: 2-835 bp Feature: gene Location: 1081-2721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1648-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 648-2269 bp Feature: domain Description: GIIM Note: maturase Location: 2314-2533 bp Feature: domain Description: GIIM Note: maturase Location: 231 4-2533 bp Feature: gene Location: 2777-3241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAURH010000240.1 Verrucomicrobiae bacterium isolate RM2_3_1 NODE_3762_length_3535_cov_6.392899, whole genome shotgun sequence (3535 bp)
Overview 1 RT 1: 73-3360 bp Neighborhood of RT #1 [73, 3360] RVT-GII GIIM Feature: gene Location: 73-447 bp Feature: gene Location: 566-1873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1490 bp Feature: domain Description: GIIM Note: maturase Location: 1565-1781 bp Feature: domain Description: GIIM Note: maturase Location: 1565-1781 bp Feature: gene Location: 1963-2097 bp Feature: gene Location: 2323-3360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAURH010000323.1 Verrucomicrobiae bacterium isolate RM2_3_1 NODE_4349_length_3224_cov_2.388118, whole genome shotgun sequence (3224 bp)
Overview 1 RT 1: 1-2994 bp Neighborhood of RT #1 [1, 3011] BsuBI_PstI_RE RVT-UG19 ligand_gated_channel Feature: gene Location: 1-522 bp Feature: domain Description: BsuBI_PstI_RE Location: 25-484 bp Feature: domain Description: BsuBI_PstI_RE Location: 25-484 bp Feature: gene Location: 538-2598 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 901-1381 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 901-13 81 bp Feature: gene Location: 2790-3011 bp Feature: domain Description: ligand_gated_channel Location: 2796-2994 bp Feature: domain Description: ligand_gated_channel Location: 2796-2994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BsuBI_PstI_RE (pfam06616), RVT-UG19, ligand_gated_channel (cd01347)