myRT

myRT report for GCA_012032345.1_ASM1203234v1

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Seq: JAAUQI010000089.1 Leptolyngbyaceae cyanobacterium RM1_1_2 NODE_1242_length_12992_cov_5.031170, whole genome shotgun sequence (12992 bp)
Overview 1 RT 1: 3-4938 bp Neighborhood of RT #1 [3, 5420] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Csx1_III-U Cas10_III Cas10_III Feature: gene Location: 3-164 bp Feature: domain Description: Cas2_I_II_III Location: 12-120 bp Feature: domain Description: Cas2_I_II_III Location: 1 2-1 20 bp Feature: gene Location: 164-2287 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 392-998 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 392-998 bp Feature: domain Description: Cas1_I-II-III Location: 1280-2249 bp Feature: domain Description: Cas1 _I-II-III Location: 1 280-2249 bp Feature: gene Location: 2479-3336 bp Feature: domain Description: Csx1_III-U Location: 3085-3265 bp Feature: domain Description: Csx1 _III-U Location: 3085-3265 bp Feature: gene Location: 3591-5420 bp Feature: domain Description: Cas10_III Location: 3609-3714 bp Feature: domain Description: Cas1 0_III Location: 3609-371 4 bp Feature: domain Description: Cas10_III Location: 4671-4938 bp Feature: domain Description: Cas1 0_III Location: 4671 -4938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Csx1_III-U (cl21570), Cas10_III (cl21742)

Seq: JAAUQI010000039.1 Leptolyngbyaceae cyanobacterium RM1_1_2 NODE_240_length_44270_cov_10.085087, whole genome shotgun sequence (44270 bp)
Overview 1 RT 1: 378-4349 bp Neighborhood of RT #1 [378, 4435] IstB_IS21_ATP IstB_IS21 PIN_VapC4-5_FitB-like RVT-GII GIIM DAGK_IM_like DDE_Tnp_1_assoc Feature: gene Location: 378-971 bp Feature: domain Description: IstB_IS21_ATP Location: 444-528 bp Feature: domain Description: IstB_IS2 1_ATP Location: 444-52 8 bp Feature: domain Description: IstB_IS21 Location: 534-963 bp Feature: domain Description: IstB_IS2 1 Location: 534-963 bp Feature: gene Location: 1265-1612 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 1328-1592 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 132 8-1592 bp Feature: gene Location: 1724-3064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2009-2624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 009-2 62 4 bp Feature: domain Description: GIIM Note: maturase Location: 2669-2870 bp Feature: domain Description: GIIM Note: maturase Location: 2 669-2 870 bp Feature: gene Location: 3534-3917 bp Feature: domain Description: DAGK_IM_like Location: 3576-3879 bp Feature: domain Description: DAGK_IM_like Location: 3576-3879 bp Feature: gene Location: 3998-4435 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 4091-4349 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 4091-4349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), PIN_VapC4-5_FitB-like (cd18754), RVT-GII, GIIM (pfam08388), DAGK_IM_like (cl00526), DDE_Tnp_1_assoc (pfam13808)