myRT

myRT report for GCA_012032575.1_ASM1203257v1

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Seq: JAAUSP010000016.1 Anaerolineales bacterium isolate SL_3_1 NODE_262_length_31181_cov_5.255297, whole genome shotgun sequence (31181 bp)
Overview 1 RT 1: 24300-28185 bp Neighborhood of RT #1 [24300, 28185] PHA02517 InsE RVT_N RVT-GII Feature: gene Location: 24300-25166 bp Feature: domain Description: PHA02517 Location: 24366-25149 bp Feature: domain Description: PHA0251 7 Location: 24366-251 49 bp Feature: gene Location: 25163-25459 bp Feature: domain Description: InsE Location: 25166-25451 bp Feature: domain Description: InsE Location: 251 66-25451 bp Feature: gene Location: 25502-26092 bp Feature: RT Description: RVT_N Location: 25535-25781 bp Feature: RT Description: RVT_N Location: 25535-25781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25826-26081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25826-26081 bp Feature: gene Location: 26478-26732 bp Feature: gene Location: 26995-28185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT_N (pfam13655), RVT-GII

Seq: JAAUSP010000562.1 Anaerolineales bacterium isolate SL_3_1 NODE_3294_length_5169_cov_2.096390, whole genome shotgun sequence (5169 bp)
Overview 1 RT 1: 3358-4989 bp Neighborhood of RT #1 [3358, 5168] Avd_like RVT-DGRs Feature: gene Location: 3358-3885 bp Feature: gene Location: 3905-4270 bp Feature: domain Description: Avd_like Location: 3935-4244 bp Feature: domain Description: Avd_like Location: 3935-42 44 bp Feature: gene Location: 4377-5168 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4410-4989 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4410-4989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: JAAUSP010000047.1 Anaerolineales bacterium isolate SL_3_1 NODE_448_length_23649_cov_3.321911, whole genome shotgun sequence (23649 bp)
Overview 1 RT 1: 18964-23036 bp Neighborhood of RT #1 [18964, 23083] RVT-DGRs RVT-DGRs pfam03781 xerC YfmG Feature: gene Location: 18964-19464 bp Feature: gene Location: 19479-19736 bp Feature: gene Location: 19837-20241 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19843-20020 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19843 -20020 bp Feature: gene Location: 20301-20780 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20376-20685 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 203 76-20685 bp Feature: gene Location: 21070-21300 bp Feature: domain Description: pfam03781 Location: 21088-21286 bp Feature: domain Description: pfam03 781 Location: 21088-21286 bp Feature: gene Location: 21380-23083 bp Feature: domain Description: xerC Location: 21419-22394 bp Feature: domain Description: xerC Location: 21419-223 94 bp Feature: domain Description: YfmG Location: 22775-23036 bp Feature: domain Description: YfmG Location: 22775-23 03 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), xerC (PRK01287), YfmG (COG1262)