myRT

myRT report for GCA_012032745.1_ASM1203274v1

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Seq: JAAUQQ010000337.1 Synechococcales cyanobacterium RM1_1_8 NODE_4033_length_5341_cov_3.357499, whole genome shotgun sequence (5341 bp)
Overview 1 RT 1: 1643-4900 bp Neighborhood of RT #1 [1643, 5340] PRK05218 group_II_RT_mat RVT-UG13 Feature: gene Location: 1643-1861 bp Feature: gene Location: 1893-3878 bp Feature: domain Description: PRK05218 Location: 1905-3870 bp Feature: domain Description: PRK0521 8 Location: 1 905-3870 bp Feature: gene Location: 4015-5340 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4150-4360 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41 50-4360 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 4432-4900 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 4432-4900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05218 (heat shock protein 90; Provisional), group_II_RT_mat (TIGR04416), RVT-UG13

Seq: JAAUQQ010000041.1 Synechococcales cyanobacterium RM1_1_8 NODE_791_length_19457_cov_5.596172, whole genome shotgun sequence (19457 bp)
Overview 1 RT 1: 9746-17776 bp Neighborhood of RT #1 [9746, 17931] integrase_gron HNH_2 RVT_N RVT-GII GIIM HNHc Eco57I TaqI_C Feature: gene Location: 9746-10549 bp Feature: domain Description: integrase_gron Location: 9776-10544 bp Feature: domain Description: integrase_gron Location: 9776-10544 bp Feature: gene Location: 11710-12816 bp Feature: domain Description: HNH_2 Location: 12457-12601 bp Feature: domain Description: HNH_2 Location: 12 457-12 601 bp Feature: gene Location: 13482-15146 bp Feature: domain Description: RVT_N Location: 13527-13773 bp Feature: domain Description: RVT_N Location: 1352 7-13773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13821-14466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1382 1-14466 bp Feature: domain Description: GIIM Note: maturase Location: 14538-14772 bp Feature: domain Description: GIIM Note: maturase Location: 14538-14772 bp Feature: domain Description: HNHc Note: nucleases Location: 14979-15141 bp Feature: domain Description: HNHc Note: nucleases Location: 14979-15141 bp Feature: gene Location: 15310-16020 bp Feature: gene Location: 16201-17931 bp Feature: domain Description: Eco57I Location: 16678-17005 bp Feature: domain Description: Eco57I Location: 16678-17005 bp Feature: domain Description: TaqI_C Location: 17338-17776 bp Feature: domain Description: TaqI_C Location: 17338-17776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT integrase_gron (TIGR02249), HNH_2 (pfam13391), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Eco57I (pfam07669), TaqI_C (pfam12950)