myRT

myRT report for GCA_012033255.1_ASM1203325v1

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Seq: JAAUSF010000012.1 Cyanobacteria bacterium RU_5_0 NODE_112_length_62132_cov_21.233836, whole genome shotgun sequence (62132 bp)
Overview 1 RT 1: 51026-58503 bp Neighborhood of RT #1 [51026, 58553] HTH_XRE pfam13191 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III 23S_rRNA_IVP Feature: gene Location: 51026-51841 bp Feature: gene Location: 51935-55603 bp Feature: domain Description: HTH_XRE Location: 51974-52130 bp Feature: domain Description: HTH_XRE Location: 51 974-521 30 bp Feature: domain Description: pfam13191 Location: 52352-52742 bp Feature: domain Description: pfam1 31 91 Location: 52352-52742 bp Feature: gene Location: 55872-57857 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 56064-56670 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 56064-56670 bp Feature: domain Description: Cas1_I-II-III Location: 56862-57819 bp Feature: domain Description: Cas1 _I-II-III Location: 56862-5781 9 bp Feature: gene Location: 57857-58135 bp Feature: domain Description: Cas2_I_II_III Location: 57866-58091 bp Feature: domain Description: Cas2_I_II_III Location: 57866-58091 bp Feature: gene Location: 58167-58553 bp Feature: domain Description: 23S_rRNA_IVP Location: 58200-58503 bp Feature: domain Description: 23S_rRNA_IVP Location: 58200-58503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), pfam13191 (AAA_16;AAA ATPase domain), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), 23S_rRNA_IVP (pfam05635)

Seq: JAAUSF010000149.1 Cyanobacteria bacterium RU_5_0 NODE_2462_length_12757_cov_4.639509, whole genome shotgun sequence (12757 bp)
Overview 1 RT 1: 2927-9334 bp Neighborhood of RT #1 [2927, 9384] DUF820 RVT_N RVT-GII GIIM McrA Peptidases_S8_S53 Uma2 Feature: gene Location: 2927-3658 bp Feature: domain Description: DUF820 Location: 3011-3425 bp Feature: domain Description: DUF82 0 Location: 3011-342 5 bp Feature: gene Location: 3846-4010 bp Feature: gene Location: 4568-6298 bp Feature: domain Description: RVT_N Location: 4598-4844 bp Feature: domain Description: RVT_N Location: 4598-4844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4889-5525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4889-552 5 bp Feature: domain Description: GIIM Note: maturase Location: 5615-5849 bp Feature: domain Description: GIIM Note: maturase Location: 5615-5849 bp Feature: domain Description: McrA Location: 5927-6197 bp Feature: domain Description: McrA Location: 592 7-6197 bp Feature: gene Location: 6477-8726 bp Feature: domain Description: Peptidases_S8_S53 Location: 7452-8553 bp Feature: domain Description: Peptidases_S8_S53 Location: 7452 -8553 bp Feature: gene Location: 8752-9384 bp Feature: domain Description: Uma2 Location: 8785-9334 bp Feature: domain Description: Uma2 Location: 8785-9334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF820, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Peptidases_S8_S53 (cl10459), Uma2 (pfam05685)