myRT

myRT report for GCA_012033305.1_ASM1203330v1

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Seq: JAAURG010000500.1 Leptolyngbyaceae cyanobacterium RM2_2_4 NODE_2291_length_4888_cov_3.655325, whole genome shotgun sequence (4888 bp)
Overview 1 RT 1: 1070-4870 bp Neighborhood of RT #1 [1070, 4887] DUF433 RVT-Retrons Trypsin_2 TPR TPR Feature: gene Location: 1070-1360 bp Feature: domain Description: DUF433 Location: 1124-1259 bp Feature: domain Description: DUF433 Location: 1 1 24-1 259 bp Feature: gene Location: 1533-1697 bp Feature: gene Location: 1729-2814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1906-2512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 906-251 2 bp Feature: gene Location: 2823-3005 bp Feature: gene Location: 3082-4887 bp Feature: domain Description: Trypsin_2 Location: 3145-3430 bp Feature: domain Description: Trypsin_2 Location: 31 45-3430 bp Feature: domain Description: TPR Location: 4348-4600 bp Feature: domain Description: TPR Location: 4348-4600 bp Feature: domain Description: TPR Location: 4621-4870 bp Feature: domain Description: TPR Location: 4621 -4870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF433 (pfam04255), RVT-Retrons, Trypsin_2 (pfam13365), TPR (smart00028)

Seq: JAAURG010000594.1 Leptolyngbyaceae cyanobacterium RM2_2_4 NODE_2848_length_4218_cov_11.989978, whole genome shotgun sequence (4218 bp)
Overview 1 RT 1: 1-4041 bp Neighborhood of RT #1 [1, 4041] retropepsin_like RVT-UG17 RT_RNaseH_2 Feature: gene Location: 1-1962 bp Feature: domain Description: retropepsin_like Location: 241-493 bp Feature: domain Description: retropepsin_like Location: 2 41-493 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1261-1435 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 12 61-1435 bp Feature: domain Description: RT_RNaseH_2 Location: 1630-1912 bp Feature: domain Description: RT_RNaseH_2 Location: 1630-1912 bp Feature: gene Location: 2032-3309 bp Feature: gene Location: 3865-4041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG17, RT_RNaseH_2 (pfam17919)