myRT

myRT report for GCA_012033345.1_ASM1203334v1

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Seq: JAAURA010000009.1 Rhodospirillales bacterium isolate RM1_5_24 NODE_2282_length_7907_cov_2.893059, whole genome shotgun sequence (7907 bp)
Overview 1 RT 1: 2-3874 bp Neighborhood of RT #1 [2, 3912] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 2-151 bp Feature: gene Location: 183-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 -1 61 1 bp Feature: gene Location: 2082-3623 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2160-2388 bp Feature: domain Description: LZ_Tnp_IS66 Location: 21 60-2388 bp Feature: domain Description: zf-IS66 Location: 2418-2547 bp Feature: domain Description: zf-IS66 Location: 241 8-2547 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2595-3465 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2595-3465 bp Feature: gene Location: 3760-3912 bp Feature: domain Description: TnpB_IS66 Location: 3763-3874 bp Feature: domain Description: TnpB_IS66 Location: 3763-3874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: JAAURA010000220.1 Rhodospirillales bacterium isolate RM1_5_24 NODE_7366_length_3762_cov_2.380743, whole genome shotgun sequence (3762 bp)
Overview 1 RT 1: 141-3219 bp Neighborhood of RT #1 [141, 3219] RVT-GII GIIM Feature: gene Location: 141-536 bp Feature: gene Location: 769-2073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1768-1984 bp Feature: domain Description: GIIM Note: maturase Location: 1768-1984 bp Feature: gene Location: 2407-2991 bp Feature: gene Location: 3016-3219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAURA010000223.1 Rhodospirillales bacterium isolate RM1_5_24 NODE_7393_length_3756_cov_3.888123, whole genome shotgun sequence (3756 bp)
Overview 1 RT 1: 55-3755 bp Neighborhood of RT #1 [55, 3755] DDE_Tnp_1_assoc DDE_Tnp_1 RVT-GII Intron_maturas2 KOG4768 Feature: gene Location: 55-552 bp Feature: gene Location: 559-1788 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 661-916 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 661-916 bp Feature: domain Description: DDE_Tnp_1 Location: 964-1273 bp Feature: domain Description: DDE_Tnp_1 Location: 964-1273 bp Feature: gene Location: 1788-3557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049-2844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049-2844 bp Feature: domain Description: Intron_maturas2 Location: 2964-3153 bp Feature: domain Description: Intron_maturas2 Location: 2964-3 153 bp Feature: domain Description: KOG4768 Location: 3366-3543 bp Feature: domain Description: KOG4768 Location: 3 3 66-3 543 bp Feature: gene Location: 3576-3755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609)

Seq: JAAURA010000240.1 Rhodospirillales bacterium isolate RM1_5_24 NODE_7830_length_3646_cov_20.917022, whole genome shotgun sequence (3646 bp)
Overview 1 RT 1: 1-3573 bp Neighborhood of RT #1 [1, 3644] RVT-GII PRK08275 Feature: gene Location: 1-327 bp Feature: gene Location: 472-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-14 17 bp Feature: gene Location: 2436-3644 bp Feature: domain Description: PRK08275 Location: 2466-3573 bp Feature: domain Description: PRK08275 Location: 24 66-3573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08275 (putative oxidoreductase; Provisional), RVT-GII

Seq: JAAURA010000341.1 Rhodospirillales bacterium isolate RM1_5_24 NODE_9264_length_3316_cov_3.071182, whole genome shotgun sequence (3316 bp)
Overview 1 RT 1: 3-3138 bp Neighborhood of RT #1 [3, 3138] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 3-497 bp Feature: gene Location: 373-1698 bp Feature: domain Description: DDE_Tnp_1 Location: 772-1426 bp Feature: domain Description: DDE_Tnp_1 Location: 772-1426 bp Feature: gene Location: 1785-2426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1791-2031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1791-2031 bp Feature: domain Description: GIIM Note: maturase Location: 2121-2325 bp Feature: domain Description: GIIM Note: maturase Location: 2121-2325 bp Feature: gene Location: 2560-2805 bp Feature: gene Location: 2875-3138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)