myRT

myRT report for GCA_012034375.1_ASM1203437v1

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Seq: JAAVLU010000014.1 Escherichia coli strain S662 SQ57_S9_L001_R1_S662_(paired)_contig_14, whole genome shotgun sequence (35755 bp)
Overview 1 RT 1: 25094-29554 bp Neighborhood of RT #1 [25094, 29610] PRK09692 RVT-Retrons Psu PRK09678 Feature: gene Location: 25094-26284 bp Feature: domain Description: PRK09692 Location: 25097-26276 bp Feature: domain Description: PRK09692 Location: 25097-26276 bp Feature: gene Location: 26532-27500 bp Feature: gene Location: 27497-28444 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27599-28190 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27599-281 90 bp Feature: gene Location: 28782-29348 bp Feature: domain Description: Psu Location: 28800-29343 bp Feature: domain Description: Psu Location: 28800-29343 bp Feature: gene Location: 29365-29610 bp Feature: domain Description: PRK09678 Location: 29368-29554 bp Feature: domain Description: PRK09678 Location: 29368-29554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JAAVLU010000026.1 Escherichia coli strain S662 SQ57_S9_L001_R1_S662_(paired)_contig_26, whole genome shotgun sequence (66023 bp)
Overview 1 RT 1: 2-6160 bp Neighborhood of RT #1 [2, 6160] P Q RVT-Retrons DUF2971 Feature: gene Location: 2-1519 bp Feature: domain Description: P Location: 5-1514 bp Feature: domain Description: P Location: 5-1514 bp Feature: gene Location: 1519-2550 bp Feature: domain Description: Q Location: 1522-2545 bp Feature: domain Description: Q Location: 152 2 -2 545 bp Feature: gene Location: 2600-4357 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2744-3365 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 744-3365 bp Feature: gene Location: 4759-5877 bp Feature: domain Description: DUF2971 Location: 5266-5524 bp Feature: domain Description: DUF2 971 Location: 52 66-552 4 bp Feature: gene Location: 6002-6160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DUF2971 (pfam11185)

Seq: JAAVLU010000061.1 Escherichia coli strain S662 SQ57_S9_L001_R1_S662_(paired)_contig_61, whole genome shotgun sequence (7179 bp)
Overview 1 RT 1: 1156-7177 bp Neighborhood of RT #1 [1156, 7177] Q RVT-Retrons RVT-AbiP2 Feature: gene Location: 1156-2175 bp Feature: domain Description: Q Location: 1159-2170 bp Feature: domain Description: Q Location: 1159-2170 bp Feature: gene Location: 2218-2925 bp Feature: gene Location: 2922-4106 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3066-3648 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 066-3 648 bp Feature: gene Location: 4663-6207 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5080-5533 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5080-553 3 bp Feature: gene Location: 6373-6633 bp Feature: gene Location: 6695-7177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2