myRT

myRT report for GCA_012034575.1_ASM1203457v1

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Seq: JAAUPF010000003.1 Richelia sp. CSU_2_1 NODE_10_length_88145_cov_7.27032, whole genome shotgun sequence (88145 bp)
Overview 1 RT 1: 14387-17829 bp Neighborhood of RT #1 [14387, 17829] GIIM RVT_N RVT-GII Feature: gene Location: 14387-14599 bp Feature: gene Location: 14898-15245 bp Feature: domain Description: GIIM Note: maturase Location: 14901-15048 bp Feature: domain Description: GIIM Note: maturase Location: 1 4901 -1 5048 bp Feature: gene Location: 15242-16420 bp Feature: RT Description: RVT_N Location: 15278-15524 bp Feature: RT Description: RVT_N Location: 1 5278-1 5524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15566-16256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5566-1 6256 bp Feature: gene Location: 16798-16959 bp Feature: gene Location: 17137-17829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT_N (pfam13655), RVT-GII

Seq: JAAUPF010000016.1 Richelia sp. CSU_2_1 NODE_61_length_61167_cov_7.56298, whole genome shotgun sequence (61167 bp)
Overview 1 RT 1: 39118-44218 bp Neighborhood of RT #1 [39118, 44268] Avd_like RVT-DGRs YjgR Pentapeptide Pentapeptide Pentapeptide Pentapeptide Pentapeptide Pentapeptide Pentapeptide Pentapeptide Pentapeptide Feature: gene Location: 39118-39429 bp Feature: gene Location: 39422-39769 bp Feature: domain Description: Avd_like Location: 39440-39746 bp Feature: domain Description: Avd_like Location: 39440-39746 bp Feature: gene Location: 39788-40834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39998-40637 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39998-40637 bp Feature: gene Location: 40869-42611 bp Feature: domain Description: YjgR Location: 40974-42519 bp Feature: domain Description: YjgR Location: 40974-42 519 bp Feature: gene Location: 42829-44268 bp Feature: domain Description: Pentapeptide Location: 42862-42967 bp Feature: domain Description: Pentapeptide Location: 42 862 -42 967 bp Feature: domain Description: Pentapeptide Location: 42970-43087 bp Feature: domain Description: Pentapeptide Location: 42 970-43087 bp Feature: domain Description: Pentapeptide Location: 43165-43270 bp Feature: domain Description: Pentapeptide Location: 43165-432 70 bp Feature: domain Description: Pentapeptide Location: 43366-43459 bp Feature: domain Description: Pentapeptide Location: 43366-43459 bp Feature: domain Description: Pentapeptide Location: 43627-43738 bp Feature: domain Description: Pentapeptide Location: 4362 7-43738 bp Feature: domain Description: Pentapeptide Location: 43741-43858 bp Feature: domain Description: Pentapeptide Location: 43741-43858 bp Feature: domain Description: Pentapeptide Location: 43864-43975 bp Feature: domain Description: Pentapeptide Location: 43864-43975 bp Feature: domain Description: Pentapeptide Location: 43984-44095 bp Feature: domain Description: Pentapeptide Location: 43984-44095 bp Feature: domain Description: Pentapeptide Location: 44101-44218 bp Feature: domain Description: Pentapeptide Location: 44101-442 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YjgR (COG0433), Pentapeptide (pfam00805)