myRT

myRT report for GCA_012034615.1_ASM1203461v1

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Seq: JAAUPA010000010.1 Leptolyngbyaceae cyanobacterium CSU_1_4 NODE_188_length_42857_cov_2.53391, whole genome shotgun sequence (42857 bp)
Overview 1 RT 1: 6604-10966 bp Neighborhood of RT #1 [6604, 11046] PRK08181 rve RVT-GII GIIM HNHc InsQ Feature: gene Location: 6604-7386 bp Feature: domain Description: PRK08181 Location: 6655-7375 bp Feature: domain Description: PRK081 81 Location: 6655-7375 bp Feature: gene Location: 7133-8863 bp Feature: domain Description: rve Location: 7514-7904 bp Feature: domain Description: rve Location: 751 4-7904 bp Feature: gene Location: 9086-9748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9092-9410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9092-941 0 bp Feature: domain Description: GIIM Note: maturase Location: 9476-9695 bp Feature: domain Description: GIIM Note: maturase Location: 9476-9695 bp Feature: gene Location: 9761-10114 bp Feature: domain Description: HNHc Note: nucleases Location: 9923-10079 bp Feature: domain Description: HNHc Note: nucleases Location: 9923-1 0079 bp Feature: gene Location: 10099-11046 bp Feature: domain Description: InsQ Location: 10180-10966 bp Feature: domain Description: InsQ Location: 1 01 80-1 0966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAUPA010000087.1 Leptolyngbyaceae cyanobacterium CSU_1_4 NODE_892_length_17168_cov_2.27234, whole genome shotgun sequence (17168 bp)
Overview 1 RT 1: 6510-10265 bp Neighborhood of RT #1 [6510, 10270] Uma2 IspD RVT-GII Intron_maturas2 AnsA2 Feature: gene Location: 6510-7157 bp Feature: domain Description: Uma2 Location: 6567-7047 bp Feature: domain Description: Uma2 Location: 6567-7047 bp Feature: gene Location: 7205-7927 bp Feature: domain Description: IspD Location: 7208-7877 bp Feature: domain Description: IspD Location: 72 08-7877 bp Feature: gene Location: 8131-8859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8311-8503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8311-8503 bp Feature: domain Description: Intron_maturas2 Location: 8596-8806 bp Feature: domain Description: Intron_maturas2 Location: 8596-8806 bp Feature: gene Location: 8949-9110 bp Feature: gene Location: 9323-10270 bp Feature: domain Description: AnsA2 Location: 9329-10265 bp Feature: domain Description: AnsA2 Location: 932 9-102 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), IspD (pfam01128), RVT-GII, Intron_maturas2 (pfam01348), AnsA2 (COG4448)