myRT

myRT report for GCA_012034765.1_ASM1203476v1

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Seq: JAAUOU010000019.1 Hyellaceae cyanobacterium CSU_1_1 NODE_129_length_47945_cov_4.14331, whole genome shotgun sequence (47945 bp)
Overview 1 RT 1: 35193-43251 bp Neighborhood of RT #1 [35193, 43295] phoU_full BaeS RVT-GII GIIM McrA RVT-GII GIIM HNHc RVT_N RVT-GII Acetyltransf_3 CyoE Feature: gene Location: 35193-35888 bp Feature: domain Description: phoU_full Location: 35262-35883 bp Feature: domain Description: phoU_full Location: 35262-35883 bp Feature: gene Location: 36035-37279 bp Feature: domain Description: BaeS Location: 36317-37262 bp Feature: domain Description: BaeS Location: 3631 7-37262 bp Feature: gene Location: 37510-38454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37621-37870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37621 -37870 bp Feature: domain Description: GIIM Note: maturase Location: 37927-38119 bp Feature: domain Description: GIIM Note: maturase Location: 37927-381 1 9 bp Feature: domain Description: McrA Location: 38161-38425 bp Feature: domain Description: McrA Location: 381 61 -38425 bp Feature: gene Location: 38457-40118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38739-39423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38739-39423 bp Feature: domain Description: GIIM Note: maturase Location: 39489-39705 bp Feature: domain Description: GIIM Note: maturase Location: 39489-39705 bp Feature: domain Description: HNHc Note: nucleases Location: 39942-40095 bp Feature: domain Description: HNHc Note: nucleases Location: 39942-40095 bp Feature: gene Location: 40449-40628 bp Feature: gene Location: 40706-41437 bp Feature: RT Description: RVT_N Location: 40742-40988 bp Feature: RT Description: RVT_N Location: 40742-40988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41039-41411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 039-41 41 1 bp Feature: gene Location: 42018-42227 bp Feature: domain Description: Acetyltransf_3 Location: 42039-42222 bp Feature: domain Description: Acetyltransf_3 Location: 42039-42222 bp Feature: gene Location: 42351-43295 bp Feature: domain Description: CyoE Location: 42375-43251 bp Feature: domain Description: CyoE Location: 42375-43251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phoU_full (TIGR02135), BaeS (COG0642), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNHc (smart00507), RVT_N (pfam13655), Acetyltransf_3 (pfam13302), CyoE (COG0109)

Seq: JAAUOU010000047.1 Hyellaceae cyanobacterium CSU_1_1 NODE_323_length_33350_cov_4.52325, whole genome shotgun sequence (33350 bp)
Overview 1 RT 1: 1601-5098 bp Neighborhood of RT #1 [1601, 5098] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 1601-2155 bp Feature: gene Location: 2512-2679 bp Feature: gene Location: 2962-4485 bp Feature: RT Description: RVT_N Location: 3007-3253 bp Feature: RT Description: RVT_N Location: 3007-32 53 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3304-3724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3304-372 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3733-3898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3733-3898 bp Feature: domain Description: GIIM Note: maturase Location: 3958-4081 bp Feature: domain Description: GIIM Note: maturase Location: 3958-4081 bp Feature: domain Description: McrA Location: 4213-4456 bp Feature: domain Description: McrA Location: 42 13-4456 bp Feature: gene Location: 4625-4885 bp Feature: gene Location: 4886-5098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)