myRT

myRT report for GCA_012034815.1_ASM1203481v1

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Seq: JAAUON010000195.1 Cyanobacteria bacterium CRU_2_1 NODE_1046_length_13507_cov_1.93984, whole genome shotgun sequence (13507 bp)
Overview 1 RT 1: 3335-7184 bp Neighborhood of RT #1 [3335, 7184] Cas_Cas02710 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 3335-4084 bp Feature: domain Description: Cas_Cas02710 Location: 3695-3980 bp Feature: domain Description: Cas_Cas0271 0 Location: 3695-3980 bp Feature: gene Location: 4094-4270 bp Feature: gene Location: 4344-6554 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4605-5202 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4605-5202 bp Feature: domain Description: Cas1_I-II-III Location: 5493-6516 bp Feature: domain Description: Cas1 _I-II-III Location: 5493-651 6 bp Feature: gene Location: 6514-6708 bp Feature: domain Description: Cas2_I_II_III Location: 6568-6694 bp Feature: domain Description: Cas2_I_II_III Location: 6568-6694 bp Feature: gene Location: 7029-7184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas02710 (pfam09670), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: JAAUON010000492.1 Cyanobacteria bacterium CRU_2_1 NODE_13949_length_3011_cov_1.24376, whole genome shotgun sequence (3011 bp)
Overview 1 RT 1: 1-2785 bp Neighborhood of RT #1 [1, 3009] RVT-DGRs Avd_like COG4249 YfmG Feature: gene Location: 1-759 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 208-760 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 08-760 bp Feature: gene Location: 756-1100 bp Feature: domain Description: Avd_like Location: 774-1080 bp Feature: domain Description: Avd_like Location: 774-1080 bp Feature: gene Location: 1066-3009 bp Feature: domain Description: COG4249 Location: 1072-1633 bp Feature: domain Description: COG42 49 Location: 1072 -1633 bp Feature: domain Description: YfmG Location: 2041-2785 bp Feature: domain Description: YfmG Location: 2 041-2 785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), COG4249 (Uncharacterized protein, contains caspase domain ), YfmG (COG1262)

Seq: JAAUON010000099.1 Cyanobacteria bacterium CRU_2_1 NODE_402_length_25194_cov_5.30004, whole genome shotgun sequence (25194 bp)
Overview 1 RT 1: 3888-7829 bp Neighborhood of RT #1 [3888, 7829] RVT_N RVT-GII RVT-GII GIIM TetR_N TetR_C_1 Feature: gene Location: 3888-4145 bp Feature: gene Location: 4325-4489 bp Feature: gene Location: 4539-5267 bp Feature: domain Description: RVT_N Location: 4584-4830 bp Feature: domain Description: RVT_N Location: 4584-483 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4878-5253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4878-5253 bp Feature: gene Location: 5276-5956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5282-5522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5282-5522 bp Feature: domain Description: GIIM Note: maturase Location: 5597-5828 bp Feature: domain Description: GIIM Note: maturase Location: 5597-5828 bp Feature: gene Location: 6604-7263 bp Feature: domain Description: TetR_N Location: 6667-6796 bp Feature: domain Description: TetR_N Location: 6667-6796 bp Feature: domain Description: TetR_C_1 Location: 6835-7258 bp Feature: domain Description: TetR_C_1 Location: 683 5-7258 bp Feature: gene Location: 7407-7829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_1

Seq: JAAUON010000134.1 Cyanobacteria bacterium CRU_2_1 NODE_579_length_19783_cov_5.09875, whole genome shotgun sequence (19783 bp)
Overview 1 RT 1: 565-5255 bp Neighborhood of RT #1 [565, 5269] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Csx1_III-U Cas6 Sigma70_r4_2 Feature: gene Location: 565-840 bp Feature: domain Description: Cas2_I_II_III Location: 574-799 bp Feature: domain Description: Cas2_I_II_III Location: 574 -799 bp Feature: gene Location: 865-3021 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1081-1726 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1081-1726 bp Feature: domain Description: Cas1_I-II-III Location: 1999-2983 bp Feature: domain Description: Cas1_I-II-III Location: 1999-2983 bp Feature: gene Location: 3035-3901 bp Feature: domain Description: Csx1_III-U Location: 3629-3836 bp Feature: domain Description: Csx1_III-U Location: 3629-3836 bp Feature: gene Location: 4058-5269 bp Feature: domain Description: Cas6 Location: 4070-5000 bp Feature: domain Description: Cas6 Location: 4 070-5000 bp Feature: domain Description: Sigma70_r4_2 Location: 5153-5255 bp Feature: domain Description: Sigma70_r4 _2 Location: 5153-5255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Csx1_III-U (cl21570), Cas6 (pfam09559), Sigma70_r4_2 (pfam08281)

Seq: JAAUON010000442.1 Cyanobacteria bacterium CRU_2_1 NODE_9828_length_3717_cov_1.65014, whole genome shotgun sequence (3717 bp)
Overview 1 RT 1: 1299-3605 bp Neighborhood of RT #1 [1299, 3613] YfmG Avd_like RVT-DGRs YfmG Feature: gene Location: 1299-1544 bp Feature: domain Description: YfmG Location: 1302-1527 bp Feature: domain Description: YfmG Location: 1302-15 27 bp Feature: gene Location: 1647-1991 bp Feature: domain Description: Avd_like Location: 1665-1971 bp Feature: domain Description: Avd_like Location: 1665 -1971 bp Feature: gene Location: 1958-3085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2198-2840 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2198-2840 bp Feature: gene Location: 3106-3333 bp Feature: gene Location: 3443-3613 bp Feature: domain Description: YfmG Location: 3482-3605 bp Feature: domain Description: YfmG Location: 3482-3605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs