myRT

myRT report for GCA_012034865.1_ASM1203486v1

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Seq: JAAUOM010000236.1 Acaryochloris sp. CRU_2_0 NODE_10330_length_3606_cov_2.0092, whole genome shotgun sequence (3606 bp)
Overview 1 RT 1: 188-3603 bp Neighborhood of RT #1 [188, 3603] integrase_gron RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 188-574 bp Feature: domain Description: integrase_gron Location: 284-512 bp Feature: domain Description: integrase_gron Location: 284-51 2 bp Feature: gene Location: 1255-2064 bp Feature: domain Description: RVT_N Location: 1300-1540 bp Feature: domain Description: RVT_N Location: 1 300-1 540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1594-2026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 594-2026 bp Feature: gene Location: 2169-2924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2172-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 72-2238 bp Feature: domain Description: GIIM Note: maturase Location: 2310-2544 bp Feature: domain Description: GIIM Note: maturase Location: 231 0-2544 bp Feature: domain Description: HNHc Note: nucleases Location: 2682-2913 bp Feature: domain Description: HNHc Note: nucleases Location: 2682-291 3 bp Feature: gene Location: 3108-3272 bp Feature: gene Location: 3334-3603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT integrase_gron (TIGR02249), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAUOM010000056.1 Acaryochloris sp. CRU_2_0 NODE_330_length_28531_cov_5.92987, whole genome shotgun sequence (28531 bp)
Overview 1 RT 1: 8167-13642 bp Neighborhood of RT #1 [8167, 13642] Csx1_III-U RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 8167-8355 bp Feature: gene Location: 10095-10949 bp Feature: domain Description: Csx1_III-U Location: 10632-10869 bp Feature: domain Description: Csx1_III-U Location: 10632 -10869 bp Feature: gene Location: 10954-13041 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 11161-11767 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 11161-11767 bp Feature: domain Description: Cas1_I-II-III Location: 12046-13006 bp Feature: domain Description: Cas1_I-II-III Location: 12 046-13006 bp Feature: gene Location: 13083-13364 bp Feature: domain Description: Cas2_I_II_III Location: 13098-13323 bp Feature: domain Description: Cas2 _I_II_III Location: 13098-1332 3 bp Feature: gene Location: 13490-13642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx1_III-U (cl21570), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: JAAUOM010000092.1 Acaryochloris sp. CRU_2_0 NODE_661_length_18159_cov_7.30324, whole genome shotgun sequence (18159 bp)
Overview 1 RT 1: 2697-7891 bp Neighborhood of RT #1 [2697, 7891] FhaB RVT_N RVT-GII GIIM HNH Feature: gene Location: 2697-5105 bp Feature: domain Description: FhaB Location: 2706-5046 bp Feature: domain Description: FhaB Location: 2706-5046 bp Feature: gene Location: 5156-5527 bp Feature: gene Location: 5587-7272 bp Feature: domain Description: RVT_N Location: 5641-5881 bp Feature: domain Description: RVT_N Location: 5641-5881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5935-6577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 593 5-6577 bp Feature: domain Description: GIIM Note: maturase Location: 6637-6865 bp Feature: domain Description: GIIM Note: maturase Location: 663 7-6865 bp Feature: domain Description: HNH Note: nucleases Location: 7117-7255 bp Feature: domain Description: HNH Note: nucleases Location: 7117-7255 bp Feature: gene Location: 7304-7606 bp Feature: gene Location: 7718-7891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhaB (COG3210), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JAAUOM010000231.1 Acaryochloris sp. CRU_2_0 NODE_9742_length_3734_cov_5.22817, whole genome shotgun sequence (3734 bp)
Overview 1 RT 1: 718-3731 bp Neighborhood of RT #1 [718, 3733] FKBP_C RVT-CRISPR Cas_Cas1 Feature: gene Location: 718-1125 bp Feature: domain Description: FKBP_C Location: 778-1039 bp Feature: domain Description: FKBP_C Location: 778-1039 bp Feature: gene Location: 1507-1689 bp Feature: gene Location: 1802-3733 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2006-2612 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2006-2612 bp Feature: domain Description: Cas_Cas1 Location: 2900-3731 bp Feature: domain Description: Cas_Cas1 Location: 2900-3731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FKBP_C (pfam00254), RVT-CRISPR, Cas_Cas1 (pfam01867)