myRT

myRT report for GCA_012056685.1_ASM1205668v1

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Seq: BHWJ01000002.1 Escherichia coli MH15-214M DNA, contig_2_1, whole genome shotgun sequence (132975 bp)
Overview 1 RT 1: 46264-50146 bp Neighborhood of RT #1 [46264, 50151] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 46264-46722 bp Feature: domain Description: dut Location: 46270-46717 bp Feature: domain Description: dut Location: 46270-4671 7 bp Feature: gene Location: 46829-47425 bp Feature: domain Description: slmA Location: 46835-47411 bp Feature: domain Description: slmA Location: 46835-4741 1 bp Feature: gene Location: 47471-48430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47606-48155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47606-481 55 bp Feature: gene Location: 48728-49384 bp Feature: domain Description: pyrE Location: 48746-49379 bp Feature: domain Description: pyrE Location: 48746-49379 bp Feature: gene Location: 49435-50151 bp Feature: domain Description: rph Location: 49438-50146 bp Feature: domain Description: rph Location: 49438-501 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BHWJ01000022.1 Escherichia coli MH15-214M DNA, contig_14_1, whole genome shotgun sequence (22669 bp)
Overview 1 RT 1: 4644-8283 bp Neighborhood of RT #1 [4644, 8283] PRK15442 RVT-GII ParE_toxin Feature: gene Location: 4644-5504 bp Feature: domain Description: PRK15442 Location: 4653-5502 bp Feature: domain Description: PRK15442 Location: 4653-5502 bp Feature: gene Location: 5838-6110 bp Feature: gene Location: 6121-7536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6406-7093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6406-7093 bp Feature: gene Location: 7787-7990 bp Feature: domain Description: ParE_toxin Location: 7802-7985 bp Feature: domain Description: ParE_toxin Location: 7802 -7985 bp Feature: gene Location: 8116-8283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15442 (beta-lactamase TEM; Provisional), RVT-GII, ParE_toxin (pfam05016)

Seq: BHWJ01000063.1 Escherichia coli MH15-214M DNA, contig_42_1, whole genome shotgun sequence (65157 bp)
Overview 1 RT 1: 24920-27985 bp Neighborhood of RT #1 [24920, 27985] RVT-GII GIIM RVT-GII Feature: gene Location: 24920-25090 bp Feature: gene Location: 25228-25407 bp Feature: gene Location: 25506-26027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25512-25794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25512-25794 bp Feature: domain Description: GIIM Note: maturase Location: 25842-26022 bp Feature: domain Description: GIIM Note: maturase Location: 25842-26022 bp Feature: gene Location: 26055-26594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26385-26463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 85-26463 bp Feature: gene Location: 26625-26822 bp Feature: gene Location: 27080-27985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BHWJ01000097.1 Escherichia coli MH15-214M DNA, contig_72_1, whole genome shotgun sequence (18234 bp)
Overview 1 RT 1: 2304-6304 bp Neighborhood of RT #1 [2304, 6312] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2304-3665 bp Feature: domain Description: DcuC Location: 2307-3639 bp Feature: domain Description: DcuC Location: 2307-3639 bp Feature: gene Location: 3718-4089 bp Feature: gene Location: 4311-4757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4617-4719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 617-4 719 bp Feature: gene Location: 4805-4954 bp Feature: gene Location: 5281-6312 bp Feature: domain Description: Asparaginase_2 Location: 5371-6304 bp Feature: domain Description: Asparaginase_2 Location: 5371-6304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)