myRT

myRT report for GCA_012057105.1_ASM1205710v1

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Seq: BHWO01000195.1 Escherichia coli MH15-272M DNA, contig_107_1, whole genome shotgun sequence (15504 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA0251 7 Location: 2336-2438 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: BHWO01000214.1 Escherichia coli MH15-272M DNA, contig_121_1, whole genome shotgun sequence (47126 bp)
Overview 1 RT 1: 24603-27625 bp Neighborhood of RT #1 [24603, 27625] RVT-GII RVT-GII GIIM Feature: gene Location: 24603-25508 bp Feature: gene Location: 25766-25963 bp Feature: gene Location: 25994-26533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26324-26402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 632 4-2 6402 bp Feature: gene Location: 26561-27082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26567-26849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6567-2 6849 bp Feature: domain Description: GIIM Note: maturase Location: 26897-27077 bp Feature: domain Description: GIIM Note: maturase Location: 2 6897-2 7077 bp Feature: gene Location: 27181-27327 bp Feature: gene Location: 27437-27625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BHWO01000325.1 Escherichia coli MH15-272M DNA, contig_208_1, whole genome shotgun sequence (10397 bp)
Overview 1 RT 1: 6436-9458 bp Neighborhood of RT #1 [6436, 10396] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 Feature: gene Location: 6436-7356 bp Feature: domain Description: AbiEii Location: 6478-7219 bp Feature: domain Description: AbiEii Location: 6478-7219 bp Feature: gene Location: 7343-8146 bp Feature: domain Description: AbiEi_3_N Location: 7376-7637 bp Feature: domain Description: AbiEi_3 _N Location: 73 76-763 7 bp Feature: domain Description: AbiEi_3 Location: 7649-8105 bp Feature: domain Description: AbiEi_3 Location: 7649-8105 bp Feature: gene Location: 8441-10396 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8969-9458 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8969-9458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5

Seq: BHWO01000432.1 Escherichia coli MH15-272M DNA, contig_292_1, whole genome shotgun sequence (711 bp)
Overview 1 RT 1: 3-495 bp Neighborhood of RT #1 [3, 710] RVT-Retrons Feature: gene Location: 3-710 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-4 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons