myRT

myRT report for GCA_012062845.1_ASM1206284v1

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Seq: WWNB01000025.1 Halomonas sp. G5-11 Scaffold25, whole genome shotgun sequence (41260 bp)
Overview 1 RT 1: 3-3808 bp Neighborhood of RT #1 [3, 3808] COG5659 RVT-GII Feature: gene Location: 3-236 bp Feature: domain Description: COG5659 Location: 6-189 bp Feature: domain Description: COG5659 Location: 6-1 89 bp Feature: gene Location: 1270-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1273-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 273-1 861 bp Feature: gene Location: 2760-3077 bp Feature: gene Location: 3293-3808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG5659 (SRSO17 transposase )

Seq: WWNB01000030.1 Halomonas sp. G5-11 Scaffold30, whole genome shotgun sequence (21111 bp)
Overview 1 RT 1: 765-3775 bp Neighborhood of RT #1 [765, 3960] Tra5 RVT-GII GIIM HTH_32 Feature: gene Location: 765-1499 bp Feature: domain Description: Tra5 Location: 864-1332 bp Feature: domain Description: Tra5 Location: 864-1332 bp Feature: gene Location: 1435-1566 bp Feature: gene Location: 1679-2932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994-2681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994-2 681 bp Feature: domain Description: GIIM Note: maturase Location: 2759-2924 bp Feature: domain Description: GIIM Note: maturase Location: 2 759-2 92 4 bp Feature: gene Location: 3007-3336 bp Feature: gene Location: 3451-3960 bp Feature: domain Description: HTH_32 Location: 3562-3775 bp Feature: domain Description: HTH_32 Location: 3562 -3775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), Tra5 (COG2801)

Seq: WWNB01000039.1 Halomonas sp. G5-11 Scaffold39, whole genome shotgun sequence (1901 bp)
Overview 1 RT 1: 79-1689 bp Neighborhood of RT #1 [79, 1689] RVT-GII GIIM Feature: gene Location: 79-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-93 7 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1240 bp Feature: gene Location: 1462-1689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WWNB01000042.1 Halomonas sp. G5-11 Scaffold42, whole genome shotgun sequence (1836 bp)
Overview 1 RT 1: 86-1683 bp Neighborhood of RT #1 [86, 1835] RVT-GII GIIM Feature: gene Location: 86-472 bp Feature: gene Location: 543-1835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 795-1413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 795-14 13 bp Feature: domain Description: GIIM Note: maturase Location: 1464-1683 bp Feature: domain Description: GIIM Note: maturase Location: 14 64 -1683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)