myRT

myRT report for GCA_012063065.1_ASM1206306v1

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Seq: WVVC01000002.1 Escherichia coli strain NIFDS_EC2017_203 EC2017_203_Contig2, whole genome shotgun sequence (302911 bp)
Overview 1 RT 1: 258907-267313 bp Neighborhood of RT #1 [258907, 267321] prfC PRK10597 RVT-Retrons TIR_2 phage_tail_N Peptidase_S74 APC_N_CC Feature: gene Location: 258907-260493 bp Feature: domain Description: prfC Location: 258925-260491 bp Feature: domain Description: prfC Location: 258925-260491 bp Feature: gene Location: 260713-260973 bp Feature: domain Description: PRK10597 Location: 260716-260956 bp Feature: domain Description: PRK1 0597 Location: 26071 6-260956 bp Feature: gene Location: 261331-262935 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261622-262213 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261 622-26221 3 bp Feature: domain Description: TIR_2 Location: 262540-262873 bp Feature: domain Description: TIR_2 Location: 262540-262873 bp Feature: gene Location: 263265-263438 bp Feature: gene Location: 263563-267321 bp Feature: domain Description: phage_tail_N Location: 263566-263965 bp Feature: domain Description: phage_tail_N Location: 263566-263965 bp Feature: domain Description: Peptidase_S74 Location: 266890-267037 bp Feature: domain Description: Peptidase_S74 Location: 266890-267037 bp Feature: domain Description: APC_N_CC Location: 267190-267313 bp Feature: domain Description: APC_N_CC Location: 2671 90-26731 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), phage_tail_N (pfam08400), Peptidase_S74 (pfam13884), APC_N_CC (pfam16689)

Seq: WVVC01000051.1 Escherichia coli strain NIFDS_EC2017_203 EC2017_203_Contig51, whole genome shotgun sequence (11766 bp)
Overview 1 RT 1: 4858-7844 bp Neighborhood of RT #1 [4858, 7844] RVT-GII GIIM RVT-GII Feature: gene Location: 4858-5043 bp Feature: gene Location: 5216-5386 bp Feature: gene Location: 5549-6202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5552-5960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5552 -5960 bp Feature: domain Description: GIIM Note: maturase Location: 6008-6200 bp Feature: domain Description: GIIM Note: maturase Location: 6008-62 00 bp Feature: gene Location: 6175-6609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-6583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-6583 bp Feature: gene Location: 6778-6975 bp Feature: gene Location: 7518-7844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)