myRT

myRT report for GCA_012102405.1_ASM1210240v1

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Seq: JAAVMN010000004.1 Citrobacter freundii strain UFMG-H9 NODE_4_length_444230_cov_22.090258, whole genome shotgun sequence (444230 bp)
Overview 1 RT 1: 320790-327596 bp Neighborhood of RT #1 [320790, 327596] Phage_int_SAM_2 Integrase_1 COG2865 RVT-Retrons TIR_2 Feature: gene Location: 320790-321824 bp Feature: domain Description: Phage_int_SAM_2 Location: 320949-321216 bp Feature: domain Description: Phage_int_SAM_2 Location: 320949-321 21 6 bp Feature: domain Description: Integrase_1 Location: 321255-321696 bp Feature: domain Description: Integrase_1 Location: 321 255-321 696 bp Feature: gene Location: 322599-324068 bp Feature: domain Description: COG2865 Location: 322641-324039 bp Feature: domain Description: COG2865 Location: 322641 -324039 bp Feature: gene Location: 324612-326243 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 324927-325521 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 324927-325521 bp Feature: domain Description: TIR_2 Location: 325848-326208 bp Feature: domain Description: TIR_2 Location: 325848-326208 bp Feature: gene Location: 326681-327256 bp Feature: gene Location: 327462-327596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-Retrons, TIR_2 (pfam13676)