myRT

myRT report for GCA_012184425.1_ASM1218442v1

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Seq: VTOW01000004.1 Candidatus Manganitrophus noduliformans strain Mn-1 Ga0306812_104, whole genome shotgun sequence (346503 bp)
Overview 1 RT 1: 129643-133717 bp Neighborhood of RT #1 [129643, 133717] PLDc_N_DEXD_b3 RVT-GII Feature: gene Location: 129643-130686 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 129694-130108 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 1 29694-1 301 08 bp Feature: gene Location: 130987-131154 bp Feature: gene Location: 131379-132914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131787-132480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 787-1 32480 bp Feature: gene Location: 132700-133113 bp Feature: gene Location: 133334-133717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_b3 (cd09205), RVT-GII

Seq: VTOW01000007.1 Candidatus Manganitrophus noduliformans strain Mn-1 Ga0306812_107, whole genome shotgun sequence (106188 bp)
Overview 1 RT 1: 100038-104329 bp Neighborhood of RT #1 [100038, 104346] ycf35 DUF1257 RVT_N RVT-GII GIIM HNHc ycf46 Feature: gene Location: 100038-100469 bp Feature: domain Description: ycf35 Location: 100041-100137 bp Feature: domain Description: ycf35 Location: 100041-100137 bp Feature: domain Description: DUF1257 Location: 100218-100437 bp Feature: domain Description: DUF12 57 Location: 1002 18-100437 bp Feature: gene Location: 100500-100661 bp Feature: gene Location: 101020-102708 bp Feature: RT Description: RVT_N Location: 101068-101311 bp Feature: RT Description: RVT_N Location: 101068-101311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101356-101992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101356-101992 bp Feature: domain Description: GIIM Note: maturase Location: 102043-102277 bp Feature: domain Description: GIIM Note: maturase Location: 102 043-102 2 77 bp Feature: domain Description: HNHc Note: nucleases Location: 102508-102667 bp Feature: domain Description: HNHc Note: nucleases Location: 102 508-102 667 bp Feature: gene Location: 103001-103135 bp Feature: gene Location: 103306-104346 bp Feature: domain Description: ycf46 Location: 103318-104329 bp Feature: domain Description: ycf46 Location: 103318-10432 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ycf35 (CHL00193), DUF1257 (pfam06868), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), ycf46 (CHL00195)

Seq: VTOW01000009.1 Candidatus Manganitrophus noduliformans strain Mn-1 Ga0306812_109, whole genome shotgun sequence (81724 bp)
Overview 1 RT 1: 76122-80909 bp Neighborhood of RT #1 [76122, 80968] UvrD RVT_N RVT-GII YkfC HNHc antidote_CC2985 Feature: gene Location: 76122-77699 bp Feature: domain Description: UvrD Location: 76125-77685 bp Feature: domain Description: UvrD Location: 76125-77685 bp Feature: gene Location: 77739-77867 bp Feature: gene Location: 78290-79993 bp Feature: RT Description: RVT_N Location: 78341-78584 bp Feature: RT Description: RVT_N Location: 783 41-78584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78629-79271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78629-79271 bp Feature: domain Description: YkfC Location: 79391-79589 bp Feature: domain Description: YkfC Location: 793 91-79589 bp Feature: domain Description: HNHc Note: nucleases Location: 79787-79946 bp Feature: domain Description: HNHc Note: nucleases Location: 79787-79946 bp Feature: gene Location: 80395-80661 bp Feature: gene Location: 80696-80968 bp Feature: domain Description: antidote_CC2985 Location: 80705-80909 bp Feature: domain Description: antidote_CC2985 Location: 80705-80909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), antidote_CC2985 (TIGR02606)