myRT

myRT report for GCA_012241515.1_ASM1224151v1

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Seq: JAAVWX010000001.1 Ochrobactrum sp. MC-1LL 000000Farrow, whole genome shotgun sequence (1683159 bp)
Overview 1 RT 1: 1616783-1621153 bp 2 RT 2: 1639795-1643637 bp Neighborhood of RT #1 [1616783, 1621245] rve RVT-GII GIIM rve COG3547 Neighborhood of RT #2 [1639795, 1643637] MhpC PHA02517 RVT-GII GIIM Feature: gene Location: 1616783-1616983 bp Feature: gene Location: 1617023-1618519 bp Feature: domain Description: rve Location: 1617518-1617857 bp Feature: domain Description: rve Location: 1 61 751 8-1 61 7857 bp Feature: gene Location: 1618774-1619637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1618780-1619116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 8780-1 61 91 1 6 bp Feature: domain Description: GIIM Note: maturase Location: 1619188-1619416 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 91 88-1 61 941 6 bp Feature: gene Location: 1619717-1619938 bp Feature: domain Description: rve Location: 1619726-1619903 bp Feature: domain Description: rve Location: 1 61 9726-1 61 9903 bp Feature: gene Location: 1620166-1621245 bp Feature: domain Description: COG3547 Location: 1620208-1621153 bp Feature: domain Description: COG3547 Location: 1 620208-1 621 1 53 bp Feature: gene Location: 1639795-1640649 bp Feature: domain Description: MhpC Location: 1639873-1640629 bp Feature: domain Description: MhpC Location: 1 639873-1 640629 bp Feature: gene Location: 1640741-1641043 bp Feature: domain Description: PHA02517 Location: 1640795-1640879 bp Feature: domain Description: PHA0251 7 Location: 1 640795-1 640879 bp Feature: gene Location: 1641068-1642597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1641341-1642076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 641 341 -1 642076 bp Feature: domain Description: GIIM Note: maturase Location: 1642148-1642376 bp Feature: domain Description: GIIM Note: maturase Location: 1 6421 48-1 642376 bp Feature: gene Location: 1642440-1643258 bp Feature: gene Location: 1643380-1643637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), MhpC (COG0596), PHA02517 (putative transposase OrfB; Reviewed)