myRT

myRT report for GCA_012267425.1_ASM1226742v1

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Seq: JAAXGO010000008.1 Rhodothermales bacterium isolate Plut_88865 filtered_Plut_88865_genomic_contig_18168, whole genome shotgun sequence (7015 bp)
Overview 1 RT 1: 1-2118 bp Neighborhood of RT #1 [1, 2141] RVT-GII GIIM CspC Feature: gene Location: 1-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1 096 bp Feature: domain Description: GIIM Note: maturase Location: 1165-1276 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 65-1 276 bp Feature: gene Location: 1256-1396 bp Feature: gene Location: 1794-2141 bp Feature: domain Description: CspC Location: 1935-2118 bp Feature: domain Description: CspC Location: 1 935-21 1 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CspC (COG1278)

Seq: JAAXGO010000303.1 Rhodothermales bacterium isolate Plut_88865 filtered_Plut_88865_genomic_contig_186963, whole genome shotgun sequence (9696 bp)
Overview 1 RT 1: 342-9657 bp Neighborhood of RT #1 [342, 9695] COG4889 Type_ISP_C RVT-UG1 beta_prop_Msarc beta_prop_Msarc Feature: gene Location: 342-539 bp Feature: gene Location: 544-4002 bp Feature: domain Description: COG4889 Location: 1585-1735 bp Feature: domain Description: COG4889 Location: 1585-1735 bp Feature: domain Description: Type_ISP_C Location: 2860-3931 bp Feature: domain Description: Type_ISP_C Location: 2 860-3931 bp Feature: gene Location: 4426-8202 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5020-5518 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 502 0-5518 bp Feature: gene Location: 8667-9695 bp Feature: domain Description: beta_prop_Msarc Location: 9468-9504 bp Feature: domain Description: beta_prop_Msarc Location: 9468-9504 bp Feature: domain Description: beta_prop_Msarc Location: 9615-9657 bp Feature: domain Description: beta_prop_Msarc Location: 9615-9657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4889 (Predicted helicase ), Type_ISP_C (pfam18135), RVT-UG1, beta_prop_Msarc (TIGR04275)

Seq: JAAXGO010000060.1 Rhodothermales bacterium isolate Plut_88865 filtered_Plut_88865_genomic_contig_77967, whole genome shotgun sequence (27641 bp)
Overview 1 RT 1: 1-4376 bp Neighborhood of RT #1 [1, 4396] RVT-GII RsbU Feature: gene Location: 1-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499-979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 499-979 bp Feature: gene Location: 1241-1633 bp Feature: gene Location: 1907-4396 bp Feature: domain Description: RsbU Location: 3515-4376 bp Feature: domain Description: RsbU Location: 3 515-43 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RsbU (COG2208)