myRT

myRT report for GCA_012267535.1_ASM1226753v1

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Seq: JAAXGH010000177.1 Deltaproteobacteria bacterium isolate Plut_88858 filtered_Plut_88858_genomic_contig_23612, whole genome shotgun sequence (17266 bp)
Overview 1 RT 1: 1677-8282 bp Neighborhood of RT #1 [1677, 8377] RMtype1_S_EcoKI_StySPI-TRD2-CR2_like RMtype1_S_EcoKI_StySPI-TRD2-CR2_like HsdM RVT-UG15 HicA_toxin HicB Feature: gene Location: 1677-2987 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 1692-2265 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 1 692-2265 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 2358-2931 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 2358-2931 bp Feature: gene Location: 2984-5668 bp Feature: domain Description: HsdM Location: 3008-4466 bp Feature: domain Description: HsdM Location: 3008-4466 bp Feature: gene Location: 5681-7270 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 6179-6578 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 61 79-6578 bp Feature: gene Location: 7785-8069 bp Feature: domain Description: HicA_toxin Location: 7848-7950 bp Feature: domain Description: HicA_toxin Location: 7848-7950 bp Feature: gene Location: 8066-8377 bp Feature: domain Description: HicB Location: 8099-8282 bp Feature: domain Description: HicB Location: 8099-8282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoKI_StySPI-TRD2-CR2_like (cd17517), HsdM (COG0286), RVT-UG15, HicA_toxin (pfam07927), HicB (pfam05534)

Seq: JAAXGH010000268.1 Deltaproteobacteria bacterium isolate Plut_88858 filtered_Plut_88858_genomic_contig_271971, whole genome shotgun sequence (4641 bp)
Overview 1 RT 1: 2-2424 bp Neighborhood of RT #1 [2, 2424] RVT-AbiP2 GIY-YIG_unchar_2 DUF4357 Feature: gene Location: 2-1282 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 218-671 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 18-671 bp Feature: gene Location: 1313-2284 bp Feature: domain Description: GIY-YIG_unchar_2 Location: 1568-1805 bp Feature: domain Description: GIY-YIG_unchar_2 Location: 1568-1805 bp Feature: domain Description: DUF4357 Location: 2072-2231 bp Feature: domain Description: DUF4357 Location: 2 072 -2 2 31 bp Feature: gene Location: 2296-2424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, GIY-YIG_unchar_2 (cd10447), DUF4357 (pfam14267)

Seq: JAAXGH010000024.1 Deltaproteobacteria bacterium isolate Plut_88858 filtered_Plut_88858_genomic_contig_91451, whole genome shotgun sequence (19743 bp)
Overview 1 RT 1: 4472-8654 bp Neighborhood of RT #1 [4472, 8654] VOC_like HTH_3 RVT-UG13 RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like Feature: gene Location: 4472-4843 bp Feature: domain Description: VOC_like Location: 4478-4826 bp Feature: domain Description: VOC_like Location: 4478-4826 bp Feature: gene Location: 5188-5556 bp Feature: domain Description: HTH_3 Location: 5386-5548 bp Feature: domain Description: HTH_3 Location: 53 86-5548 bp Feature: gene Location: 5711-6907 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 5963-6413 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 5963 -6413 bp Feature: gene Location: 7081-8445 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 7342-7627 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 73 42-7627 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 7852-8410 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 7852-8410 bp Feature: gene Location: 8445-8654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), HTH_3 (pfam01381), RVT-UG13, RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247)