myRT

myRT report for GCA_012270735.1_ASM1227073v1

Download annotations/find similar RTs

Seq: JAAXHT010000564.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_1059513, whole genome shotgun sequence (8465 bp)
Overview 1 RT 1: 562-3348 bp Neighborhood of RT #1 [562, 3348] RVT-GII Feature: gene Location: 562-690 bp Feature: gene Location: 749-1078 bp Feature: gene Location: 1128-1988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 272-1 791 bp Feature: gene Location: 1932-2492 bp Feature: gene Location: 3058-3348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAXHT010000485.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_1122117, whole genome shotgun sequence (3821 bp)
Overview 1 RT 1: 273-3703 bp Neighborhood of RT #1 [273, 3705] 2OG-FeII_Oxy_2 RVT-GII GIIM PRK06341 Feature: gene Location: 273-836 bp Feature: domain Description: 2OG-FeII_Oxy_2 Location: 417-822 bp Feature: domain Description: 2 OG-FeII_Oxy_2 Location: 417-82 2 bp Feature: gene Location: 928-1065 bp Feature: gene Location: 1359-2696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662-2295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662 -2 2 95 bp Feature: domain Description: GIIM Note: maturase Location: 2370-2589 bp Feature: domain Description: GIIM Note: maturase Location: 2 370-2 589 bp Feature: gene Location: 3256-3705 bp Feature: domain Description: PRK06341 Location: 3259-3703 bp Feature: domain Description: PRK06341 Location: 32 59-3703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2OG-FeII_Oxy_2 (pfam13532), RVT-GII, GIIM (pfam08388), PRK06341 (single-stranded DNA-binding protein; Provisional)

Seq: JAAXHT010000025.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_1154197, whole genome shotgun sequence (1282 bp)
Overview 1 RT 1: 2-932 bp Neighborhood of RT #1 [2, 931] RVT-GII Feature: gene Location: 2-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-93 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAXHT010000272.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_486347, whole genome shotgun sequence (78181 bp)
Overview 1 RT 1: 22596-29796 bp Neighborhood of RT #1 [22596, 29796] COG1743 COG1743 RVT-GII GIIM Feature: gene Location: 22596-23348 bp Feature: gene Location: 23345-25633 bp Feature: domain Description: COG1743 Location: 23720-24536 bp Feature: domain Description: COG174 3 Location: 23720-24 536 bp Feature: domain Description: COG1743 Location: 24920-25490 bp Feature: domain Description: COG174 3 Location: 24 920-254 90 bp Feature: gene Location: 26235-27725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26685-27345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26685-2734 5 bp Feature: domain Description: GIIM Note: maturase Location: 27417-27627 bp Feature: domain Description: GIIM Note: maturase Location: 274 17-27627 bp Feature: gene Location: 28734-29312 bp Feature: gene Location: 29638-29796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1743 (Adenine-specific DNA methylase, contains a Zn-ribbon domain ), RVT-GII, GIIM (pfam08388)

Seq: JAAXHT010000087.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_487177, whole genome shotgun sequence (37764 bp)
Overview 1 RT 1: 3-7295 bp Neighborhood of RT #1 [3, 7780] RVT-GII RVT-GII Cytochrome_CBB3 SQCY HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 3-152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-15 3 bp Feature: gene Location: 153-1118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-1116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-1116 bp Feature: gene Location: 644-988 bp Feature: gene Location: 2948-7780 bp Feature: domain Description: Cytochrome_CBB3 Location: 4199-4334 bp Feature: domain Description: Cytochrome_CBB3 Location: 4199-4334 bp Feature: domain Description: SQCY Location: 4844-5114 bp Feature: domain Description: SQCY Location: 4844-5 114 bp Feature: domain Description: HEAT_2 Location: 5279-5528 bp Feature: domain Description: HEAT_2 Location: 5 279-5 5 28 bp Feature: domain Description: HEAT_2 Location: 6074-6302 bp Feature: domain Description: HEAT_2 Location: 6074-6302 bp Feature: domain Description: HEAT_2 Location: 7127-7295 bp Feature: domain Description: HEAT_2 Location: 7127-7295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cytochrome_CBB3 (pfam13442), SQCY (cd02889), HEAT_2 (pfam13646)

Seq: JAAXHT010000390.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_674533, whole genome shotgun sequence (5548 bp)
Overview 1 RT 1: 3-3837 bp Neighborhood of RT #1 [3, 3878] RVT-GII GIIM xerC INT_RitB_C_like Feature: gene Location: 3-749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-381 bp Feature: domain Description: GIIM Note: maturase Location: 456-678 bp Feature: domain Description: GIIM Note: maturase Location: 456 -6 78 bp Feature: gene Location: 1958-2959 bp Feature: domain Description: xerC Location: 1976-2867 bp Feature: domain Description: xerC Location: 1976 -286 7 bp Feature: gene Location: 2952-3878 bp Feature: domain Description: INT_RitB_C_like Location: 3267-3837 bp Feature: domain Description: INT_RitB_C_like Location: 326 7-3837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), xerC (PRK01287), INT_RitB_C_like (cd00797)

Seq: JAAXHT010000234.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_790137, whole genome shotgun sequence (34033 bp)
Overview 1 RT 1: 30378-33638 bp Neighborhood of RT #1 [30378, 34030] VCBS VCBS VCBS VCBS VCBS Bthiol_YpdA RVT-GII Feature: gene Location: 30378-31529 bp Feature: domain Description: VCBS Location: 30465-30534 bp Feature: domain Description: VCBS Location: 30465-30534 bp Feature: domain Description: VCBS Location: 30654-30840 bp Feature: domain Description: VCBS Location: 30654-30840 bp Feature: domain Description: VCBS Location: 30990-31188 bp Feature: domain Description: VCBS Location: 30990-31188 bp Feature: domain Description: VCBS Location: 31263-31320 bp Feature: domain Description: VCBS Location: 31263-31320 bp Feature: domain Description: VCBS Location: 31440-31509 bp Feature: domain Description: VCBS Location: 31440-31509 bp Feature: gene Location: 31677-32642 bp Feature: domain Description: Bthiol_YpdA Location: 31680-32622 bp Feature: domain Description: Bthiol_YpdA Location: 31680-32622 bp Feature: gene Location: 33494-34030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33503-33638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33503-33638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VCBS (pfam13517), Bthiol_YpdA (TIGR04018), RVT-GII

Seq: JAAXHT010000417.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_954515, whole genome shotgun sequence (10223 bp)
Overview 1 RT 1: 325-7511 bp Neighborhood of RT #1 [325, 7534] group_II_RT_mat RVT-UNC nitrilase AAA-ATPase_like PDDEXK_9 Feature: gene Location: 325-615 bp Feature: gene Location: 1222-3885 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1363-1576 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1363-1576 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2146-2344 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2146-2344 bp Feature: gene Location: 4251-5627 bp Feature: domain Description: nitrilase Location: 5193-5439 bp Feature: domain Description: nitrilase Location: 5193-5439 bp Feature: gene Location: 6371-7534 bp Feature: domain Description: AAA-ATPase_like Location: 6374-6788 bp Feature: domain Description: AAA-ATPase_like Location: 6374-678 8 bp Feature: domain Description: PDDEXK_9 Location: 7226-7511 bp Feature: domain Description: PDDEXK_9 Location: 7226-7511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG11/RVT-CRISPR/RVT-GII/RVT-UG6(RVT-UNC), nitrilase (cl11424), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: JAAXHT010000022.1 Bryobacterales bacterium isolate Plut_88896 unfiltered_Plut_88896_genomic_contig_989831, whole genome shotgun sequence (5597 bp)
Overview 1 RT 1: 1742-5572 bp Neighborhood of RT #1 [1742, 5595] RVT-GII RVT-GII DDE_Tnp_1 Feature: gene Location: 1742-2116 bp Feature: gene Location: 2697-2888 bp Feature: gene Location: 3511-4284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3874-4282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3874-4282 bp Feature: gene Location: 4718-4960 bp Feature: gene Location: 5007-5201 bp Feature: gene Location: 4348-5595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4354-4567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4354-4567 bp Feature: domain Description: DDE_Tnp_1 Location: 5401-5572 bp Feature: domain Description: DDE_Tnp_1 Location: 5401-5572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1 (pfam01609)