myRT

myRT report for GCA_012270875.1_ASM1227087v1

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Seq: JAAXHI010000149.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1022408, whole genome shotgun sequence (1493 bp)
Overview 1 RT 1: 3-1386 bp Neighborhood of RT #1 [3, 1394] RVT-UNC RT_RNaseH_2 Feature: gene Location: 3-1394 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 672-885 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 672-885 bp Feature: domain Description: RT_RNaseH_2 Location: 1110-1386 bp Feature: domain Description: RT_RNaseH_2 Location: 1 1 1 0-1 386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3/RVT-UG4/RVT-DGRs(RVT-UNC), RT_RNaseH_2 (pfam17919)

Seq: JAAXHI010000229.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1024595, whole genome shotgun sequence (1533 bp)
Overview 1 RT 1: 3-906 bp Neighborhood of RT #1 [3, 1532] RVT-UNC Feature: gene Location: 3-1532 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 528-906 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 52 8-906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-UG25/RVT-GII/RVT-UG17(RVT-UNC)

Seq: JAAXHI010000538.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1026115, whole genome shotgun sequence (2328 bp)
Overview 1 RT 1: 3-1900 bp Neighborhood of RT #1 [3, 1900] RT_LTR RVT-DGRs Feature: gene Location: 3-1199 bp Feature: domain Description: RT_LTR Location: 732-852 bp Feature: domain Description: RT_LTR Location: 73 2-852 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1026-1194 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1026-1194 bp Feature: gene Location: 527-937 bp Feature: gene Location: 1655-1900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_LTR (cd01647), RVT-DGRs

Seq: JAAXHI010000476.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1030515, whole genome shotgun sequence (2290 bp)
Overview 1 RT 1: 3-2052 bp Neighborhood of RT #1 [3, 2288] retropepsin_like_LTR_2 RVT-DGRs Feature: gene Location: 3-2288 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 453-687 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 4 53-687 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1809-2052 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1809-2052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like_LTR_2 (cd05484), RVT-DGRs

Seq: JAAXHI010000280.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1039685, whole genome shotgun sequence (4459 bp)
Overview 1 RT 1: 91-3592 bp Neighborhood of RT #1 [91, 4458] Exo_endo_phos_2 RVT-UNC PHD_PYGO Feature: gene Location: 91-2919 bp Feature: domain Description: Exo_endo_phos_2 Location: 322-652 bp Feature: domain Description: Exo_endo_phos_2 Location: 322-65 2 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1513-1999 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15 13-1999 bp Feature: gene Location: 2983-4458 bp Feature: domain Description: PHD_PYGO Location: 3421-3592 bp Feature: domain Description: PHD_PYGO Location: 3421-35 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), PHD_PYGO (cd15551)

Seq: JAAXHI010000399.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1055425, whole genome shotgun sequence (1247 bp)
Overview 1 RT 1: 3-939 bp Neighborhood of RT #1 [3, 1244] RVT-DGRs RNase_HI_RT_Ty3 Feature: gene Location: 3-1244 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63-300 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6 3-300 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 588-939 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 588-939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RNase_HI_RT_Ty3 (cd09274)

Seq: JAAXHI010000072.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_1073695, whole genome shotgun sequence (1638 bp)
Overview 1 RT 1: 1-1635 bp Neighborhood of RT #1 [1, 1635] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 1-1275 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 13-277 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 13-27 7 bp Feature: domain Description: GIY-YIG_PLEs Location: 979-1255 bp Feature: domain Description: GIY-YIG_PLEs Location: 97 9-1255 bp Feature: gene Location: 1393-1635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-GII/RVT-UG4/RVT-UG26(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: JAAXHI010000578.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_19589, whole genome shotgun sequence (2252 bp)
Overview 1 RT 1: 1210-2215 bp Neighborhood of RT #1 [1210, 2250] RVT-UNC Feature: gene Location: 1210-1362 bp Feature: gene Location: 1520-1699 bp Feature: gene Location: 2041-2250 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2050-2215 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2050-2215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-UG24(RVT-UNC)

Seq: JAAXHI010000064.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_285210, whole genome shotgun sequence (4356 bp)
Overview 1 RT 1: 172-4092 bp Neighborhood of RT #1 [172, 4092] INT_Cre_C RVT-DGRs RNase_HI_RT_DIRS1 Feature: gene Location: 172-981 bp Feature: domain Description: INT_Cre_C Location: 397-850 bp Feature: domain Description: INT_Cre_C Location: 39 7-850 bp Feature: gene Location: 1164-2816 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1779-2001 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1779 -2001 bp Feature: domain Description: RNase_HI_RT_DIRS1 Location: 2373-2724 bp Feature: domain Description: RNase_HI_RT_DIRS1 Location: 2373-2724 bp Feature: gene Location: 2725-2967 bp Feature: gene Location: 3634-4092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-DGRs, RNase_HI_RT_DIRS1 (cd09275)

Seq: JAAXHI010000492.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_547890, whole genome shotgun sequence (2364 bp)
Overview 1 RT 1: 445-1991 bp Neighborhood of RT #1 [445, 2362] RVT-UNC Feature: gene Location: 445-1575 bp Feature: gene Location: 1655-2362 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1745-1991 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1745-1991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-DGRs/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: JAAXHI010000172.1 Candidatus Poribacteria bacterium isolate Plut_88885 unfiltered_Plut_88885_genomic_contig_766565, whole genome shotgun sequence (2363 bp)
Overview 1 RT 1: 559-1141 bp Neighborhood of RT #1 [559, 2361] RVT-UNC Feature: gene Location: 559-2361 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 643-1141 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 643-11 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-DGRs/RVT-CRISPR/RVT-GII(RVT-UNC)