myRT

myRT report for GCA_012273645.1_ASM1227364v1

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Seq: JAAXCN010000001.1 Pseudomonas fluorescens strain B98SM8 Scaffold1, whole genome shotgun sequence (483209 bp)
Overview 1 RT 1: 269110-272470 bp Neighborhood of RT #1 [269110, 272502] CxxC_CXXC_SSSS RVT-G2L4 INT_RitA_C_like Feature: gene Location: 269110-269571 bp Feature: gene Location: 269688-269870 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 269718-269823 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 26971 8-269823 bp Feature: gene Location: 269975-271264 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 270221-270806 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 270221 -270806 bp Feature: gene Location: 271299-271493 bp Feature: gene Location: 272086-272502 bp Feature: domain Description: INT_RitA_C_like Location: 272284-272470 bp Feature: domain Description: INT_RitA_C_like Location: 272284-272470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxC_CXXC_SSSS (smart00834), RVT-G2L4, INT_RitA_C_like (cd01188)

Seq: JAAXCN010000009.1 Pseudomonas fluorescens strain B98SM8 Scaffold9, whole genome shotgun sequence (190834 bp)
Overview 1 RT 1: 165406-170657 bp Neighborhood of RT #1 [165406, 170677] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 165406-165741 bp Feature: domain Description: TnpB_IS66 Location: 165424-165712 bp Feature: domain Description: TnpB_IS66 Location: 16542 4-165712 bp Feature: gene Location: 165803-167131 bp Feature: domain Description: LZ_Tnp_IS66 Location: 165935-166142 bp Feature: domain Description: LZ_Tnp_IS66 Location: 165935-166142 bp Feature: domain Description: zf-IS66 Location: 166181-166295 bp Feature: domain Description: zf-IS66 Location: 166181-1662 95 bp Feature: domain Description: DDE_Tnp_IS66 Location: 166337-167111 bp Feature: domain Description: DDE_Tnp_IS66 Location: 166337-167111 bp Feature: gene Location: 167689-169350 bp Feature: domain Description: RVT_N Location: 167734-167977 bp Feature: domain Description: RVT_N Location: 167734-167977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168022-168658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16802 2 -168658 bp Feature: domain Description: GIIM Note: maturase Location: 168715-168943 bp Feature: domain Description: GIIM Note: maturase Location: 168715-168943 bp Feature: gene Location: 169542-169676 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 169548-169659 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 169548-169659 bp Feature: gene Location: 169715-170677 bp Feature: domain Description: ACR3 Location: 169730-170657 bp Feature: domain Description: ACR3 Location: 169730-170657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)