myRT

myRT report for GCA_012273665.1_ASM1227366v1

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Seq: JAAXCP010000006.1 Pseudomonas fluorescens strain B98C39 Scaffold6, whole genome shotgun sequence (368438 bp)
Overview 1 RT 1: 105-2259 bp Neighborhood of RT #1 [105, 2259] RVT-G2L4 CxxC_CXXC_SSSS Feature: gene Location: 105-1394 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 351-936 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 351 -936 bp Feature: gene Location: 1499-1681 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1529-1634 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 1 529-1 634 bp Feature: gene Location: 1798-2259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, CxxC_CXXC_SSSS (smart00834)

Seq: JAAXCP010000007.1 Pseudomonas fluorescens strain B98C39 Scaffold7, whole genome shotgun sequence (366501 bp)
Overview 1 RT 1: 165382-170633 bp Neighborhood of RT #1 [165382, 170653] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 165382-165717 bp Feature: domain Description: TnpB_IS66 Location: 165400-165688 bp Feature: domain Description: TnpB_IS66 Location: 165400-165688 bp Feature: gene Location: 165779-167107 bp Feature: domain Description: LZ_Tnp_IS66 Location: 165911-166118 bp Feature: domain Description: LZ_Tnp_IS66 Location: 165911-166118 bp Feature: domain Description: zf-IS66 Location: 166157-166271 bp Feature: domain Description: zf-IS66 Location: 166157-1662 71 bp Feature: domain Description: DDE_Tnp_IS66 Location: 166313-167087 bp Feature: domain Description: DDE_Tnp_IS66 Location: 166313-167087 bp Feature: gene Location: 167665-169326 bp Feature: domain Description: RVT_N Location: 167710-167953 bp Feature: domain Description: RVT_N Location: 167710-167953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167998-168634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167998-168634 bp Feature: domain Description: GIIM Note: maturase Location: 168691-168919 bp Feature: domain Description: GIIM Note: maturase Location: 168691-168919 bp Feature: gene Location: 169518-169652 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 169524-169635 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 16952 4-169635 bp Feature: gene Location: 169691-170653 bp Feature: domain Description: ACR3 Location: 169706-170633 bp Feature: domain Description: ACR3 Location: 169706-170633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)