myRT

myRT report for GCA_012367495.1_ASM1236749v1

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Seq: JAAEVZ010000022.1 Erwinia amylovora strain Ea160-3-51 Ea_160-3-51_contig_22, whole genome shotgun sequence (82228 bp)
Overview 1 RT 1: 75962-80364 bp Neighborhood of RT #1 [75962, 80364] TraD PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 75962-76273 bp Feature: domain Description: TraD Location: 76076-76250 bp Feature: domain Description: TraD Location: 76076-76250 bp Feature: gene Location: 77105-78607 bp Feature: domain Description: PRK13889 Location: 77108-77687 bp Feature: domain Description: PRK1 3889 Location: 771 08-77687 bp Feature: gene Location: 78684-79460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78687-79053 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78687-79053 bp Feature: gene Location: 79777-80058 bp Feature: domain Description: HTH_XRE Location: 79792-79957 bp Feature: domain Description: HTH_XRE Location: 79792-79957 bp Feature: gene Location: 80149-80364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)

Seq: JAAEVZ010000030.1 Erwinia amylovora strain Ea160-3-51 Ea_160-3-51_contig_30, whole genome shotgun sequence (40817 bp)
Overview 1 RT 1: 556-5230 bp Neighborhood of RT #1 [556, 5230] TIGR04141 RVT-Retrons Feature: gene Location: 556-2163 bp Feature: domain Description: TIGR04141 Location: 580-2152 bp Feature: domain Description: TIGR04141 Location: 580-2 152 bp Feature: gene Location: 2292-2663 bp Feature: gene Location: 2944-4125 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3094-3667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3094-3667 bp Feature: gene Location: 4554-5018 bp Feature: gene Location: 5048-5230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIGR04141 (sporadically distributed protein, TIGR04141 family)