myRT

myRT report for GCA_012371655.1_ASM1237165v1

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Seq: JAAEVK010000019.1 Erwinia amylovora strain Ea433 Ea_433_contig_19, whole genome shotgun sequence (82083 bp)
Overview 1 RT 1: 1866-6245 bp Neighborhood of RT #1 [1866, 6268] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 1866-2081 bp Feature: gene Location: 2172-2453 bp Feature: domain Description: HTH_XRE Location: 2187-2352 bp Feature: domain Description: HTH_XRE Location: 21 87-2352 bp Feature: gene Location: 2770-3546 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2773-3139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2773-31 39 bp Feature: gene Location: 3623-5125 bp Feature: domain Description: PRK13889 Location: 3626-4205 bp Feature: domain Description: PRK1 3889 Location: 3626-4205 bp Feature: gene Location: 5957-6268 bp Feature: domain Description: TraD Location: 6071-6245 bp Feature: domain Description: TraD Location: 6071 -6245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)

Seq: JAAEVK010000029.1 Erwinia amylovora strain Ea433 Ea_433_contig_29, whole genome shotgun sequence (40830 bp)
Overview 1 RT 1: 35589-40259 bp Neighborhood of RT #1 [35589, 40270] RVT-Retrons TIGR04141 Feature: gene Location: 35589-35771 bp Feature: gene Location: 35801-36127 bp Feature: gene Location: 36701-37882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36851-37424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36851-3742 4 bp Feature: gene Location: 38163-38534 bp Feature: gene Location: 38663-40270 bp Feature: domain Description: TIGR04141 Location: 38687-40259 bp Feature: domain Description: TIGR04141 Location: 38687-402 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIGR04141 (sporadically distributed protein, TIGR04141 family)