myRT

myRT report for GCA_012395345.1_ASM1239534v1

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Seq: JAAVIN010000002.1 Bacillus cereus strain M4 contig2, whole genome shotgun sequence (490125 bp)
Overview 1 RT 1: 410357-416443 bp Neighborhood of RT #1 [410357, 416463] PRK00148 PRK00024 RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 410357-410968 bp Feature: domain Description: PRK00148 Location: 410402-410963 bp Feature: domain Description: PRK001 48 Location: 41 0402-41 0963 bp Feature: gene Location: 411015-411656 bp Feature: domain Description: PRK00024 Location: 411027-411642 bp Feature: domain Description: PRK00024 Location: 41 1 027-41 1 642 bp Feature: gene Location: 412357-414228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412678-413386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 2678-41 3386 bp Feature: domain Description: HNHc Note: nucleases Location: 413980-414148 bp Feature: domain Description: HNHc Note: nucleases Location: 41 3980-41 41 48 bp Feature: gene Location: 414551-415570 bp Feature: domain Description: PRK13927 Location: 414569-415559 bp Feature: domain Description: PRK1 3927 Location: 41 4569-41 5559 bp Feature: gene Location: 415612-416463 bp Feature: domain Description: PRK13922 Location: 415615-416443 bp Feature: domain Description: PRK1 3922 Location: 41 561 5-41 6443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), PRK00024 (DNA repair protein RadC), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: JAAVIN010000023.1 Bacillus cereus strain M4 contig23, whole genome shotgun sequence (15488 bp)
Overview 1 RT 1: 171-11963 bp Neighborhood of RT #1 [171, 11963] B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 171-1451 bp Feature: domain Description: B_ant_repeat Location: 249-360 bp Feature: domain Description: B_ant_repeat Location: 2 49-360 bp Feature: domain Description: B_ant_repeat Location: 600-756 bp Feature: domain Description: B_ant_repeat Location: 600-756 bp Feature: domain Description: B_ant_repeat Location: 999-1155 bp Feature: domain Description: B_ant_repeat Location: 999-1155 bp Feature: gene Location: 2153-4081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2474-3209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 474-32 09 bp Feature: domain Description: HNHc Note: nucleases Location: 3800-3965 bp Feature: domain Description: HNHc Note: nucleases Location: 3800-3965 bp Feature: gene Location: 4250-10615 bp Feature: domain Description: B_ant_repeat Location: 4259-4397 bp Feature: domain Description: B_ant_repeat Location: 42 59-4397 bp Feature: domain Description: B_ant_repeat Location: 4634-4787 bp Feature: domain Description: B_ant_repeat Location: 4634-4787 bp Feature: domain Description: B_ant_repeat Location: 5024-5177 bp Feature: domain Description: B_ant_repeat Location: 502 4-5177 bp Feature: domain Description: B_ant_repeat Location: 5417-5573 bp Feature: domain Description: B_ant_repeat Location: 5417-5573 bp Feature: domain Description: B_ant_repeat Location: 5813-5966 bp Feature: domain Description: B_ant_repeat Location: 5813-5966 bp Feature: domain Description: B_ant_repeat Location: 6209-6365 bp Feature: domain Description: B_ant_repeat Location: 62 09-6365 bp Feature: domain Description: B_ant_repeat Location: 6605-6761 bp Feature: domain Description: B_ant_repeat Location: 6605-6761 bp Feature: domain Description: B_ant_repeat Location: 7001-7157 bp Feature: domain Description: B_ant_repeat Location: 7001-7157 bp Feature: domain Description: B_ant_repeat Location: 7397-7553 bp Feature: domain Description: B_ant_repeat Location: 7397-7553 bp Feature: domain Description: B_ant_repeat Location: 7793-7949 bp Feature: domain Description: B_ant_repeat Location: 7793-7949 bp Feature: domain Description: B_ant_repeat Location: 8189-8345 bp Feature: domain Description: B_ant_repeat Location: 8189-8345 bp Feature: domain Description: B_ant_repeat Location: 8585-8741 bp Feature: domain Description: B_ant_repeat Location: 8585-8741 bp Feature: domain Description: B_ant_repeat Location: 8981-9137 bp Feature: domain Description: B_ant_repeat Location: 8981-9137 bp Feature: domain Description: B_ant_repeat Location: 9377-9530 bp Feature: domain Description: B_ant_repeat Location: 9377-9530 bp Feature: domain Description: B_ant_repeat Location: 9773-9929 bp Feature: domain Description: B_ant_repeat Location: 9773-992 9 bp Feature: domain Description: B_ant_repeat Location: 10169-10325 bp Feature: domain Description: B_ant_repeat Location: 10169-1032 5 bp Feature: gene Location: 10884-11963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507)

Seq: JAAVIN010000005.1 Bacillus cereus strain M4 contig5, whole genome shotgun sequence (407179 bp)
Overview 1 RT 1: 370815-374806 bp Neighborhood of RT #1 [370815, 374904] amiF RVT-GII HNHc amiF YugN Feature: gene Location: 370815-371204 bp Feature: domain Description: amiF Location: 370818-371190 bp Feature: domain Description: amiF Location: 3 70818-3 71190 bp Feature: gene Location: 371351-371527 bp Feature: gene Location: 371920-373752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372220-372925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 72220-3 72925 bp Feature: domain Description: HNHc Note: nucleases Location: 373504-373636 bp Feature: domain Description: HNHc Note: nucleases Location: 3 73 504-3 73 63 6 bp Feature: gene Location: 373869-374492 bp Feature: domain Description: amiF Location: 373872-374487 bp Feature: domain Description: amiF Location: 3 73 872-3 74487 bp Feature: gene Location: 374539-374904 bp Feature: domain Description: YugN Location: 374560-374806 bp Feature: domain Description: YugN Location: 3 74560-3 74806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT amiF (PRK13287), RVT-GII, HNHc (smart00507), YugN (pfam08868)