myRT

myRT report for GCA_012395395.1_ASM1239539v1

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Seq: JAAVIQ010000036.1 Bacillus cereus strain P4 contig36, whole genome shotgun sequence (2374 bp)
Overview 1 RT 1: 619-1912 bp Neighborhood of RT #1 [619, 2265] RVT_N RVT-GII GIIM Feature: gene Location: 619-2265 bp Feature: RT Description: RVT_N Location: 661-898 bp Feature: RT Description: RVT_N Location: 661 -898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1 61 2 bp Feature: domain Description: GIIM Note: maturase Location: 1681-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1 681 -1 91 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAVIQ010000009.1 Bacillus cereus strain P4 contig9, whole genome shotgun sequence (175066 bp)
Overview 1 RT 1: 26881-30626 bp 2 RT 2: 45114-51546 bp 3 RT 3: 59132-67708 bp 4 RT 4: 83593-89296 bp Neighborhood of RT #1 [26881, 30643] RVT-GII HNHc E1_enzyme_family Neighborhood of RT #2 [45114, 51546] DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #3 [59132, 67806] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #4 [83593, 89296] TraC-F-type AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 26881-27009 bp Feature: gene Location: 27071-27598 bp Feature: gene Location: 27662-29542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27992-28721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7992 -2 872 1 bp Feature: domain Description: HNHc Note: nucleases Location: 29279-29429 bp Feature: domain Description: HNHc Note: nucleases Location: 2 92 79-2 942 9 bp Feature: gene Location: 29814-29948 bp Feature: gene Location: 30242-30643 bp Feature: domain Description: E1_enzyme_family Location: 30290-30626 bp Feature: domain Description: E1_enzyme_family Location: 302 90-3062 6 bp Feature: gene Location: 45114-45344 bp Feature: gene Location: 45837-47108 bp Feature: domain Description: DUF3854 Location: 46755-47076 bp Feature: domain Description: DUF3854 Location: 46755-47076 bp Feature: gene Location: 47113-49008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47479-48178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47479-48178 bp Feature: domain Description: GIIM Note: maturase Location: 48262-48505 bp Feature: domain Description: GIIM Note: maturase Location: 482 62 -48505 bp Feature: domain Description: HNHc Note: nucleases Location: 48751-48889 bp Feature: domain Description: HNHc Note: nucleases Location: 48751-48889 bp Feature: gene Location: 49677-49820 bp Feature: gene Location: 49996-51546 bp Feature: gene Location: 59132-60682 bp Feature: domain Description: Replic_Relax Location: 59228-59951 bp Feature: domain Description: Replic_Relax Location: 592 2 8-59951 bp Feature: gene Location: 60654-62342 bp Feature: gene Location: 62956-64773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63220-64051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632 2 0-64051 bp Feature: domain Description: Intron_maturas2 Location: 64129-64423 bp Feature: domain Description: Intron_maturas2 Location: 6412 9-6442 3 bp Feature: domain Description: HNHc Note: nucleases Location: 64570-64747 bp Feature: domain Description: HNHc Note: nucleases Location: 64570-64747 bp Feature: gene Location: 64877-66274 bp Feature: domain Description: TraG-D_C Location: 65021-65384 bp Feature: domain Description: TraG-D_C Location: 6502 1-65384 bp Feature: gene Location: 66841-67806 bp Feature: domain Description: xerC Location: 66859-67708 bp Feature: domain Description: xerC Location: 66859-67708 bp Feature: gene Location: 83593-85128 bp Feature: domain Description: TraC-F-type Location: 84283-84781 bp Feature: domain Description: TraC-F-type Location: 842 83-84781 bp Feature: domain Description: AAA_10 Location: 84934-85111 bp Feature: domain Description: AAA_10 Location: 84934-85111 bp Feature: gene Location: 85275-85451 bp Feature: gene Location: 85844-87676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86144-86849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86144-86849 bp Feature: domain Description: HNHc Note: nucleases Location: 87428-87560 bp Feature: domain Description: HNHc Note: nucleases Location: 8742 8-87560 bp Feature: gene Location: 87934-88812 bp Feature: domain Description: AAA_10 Location: 87940-88696 bp Feature: domain Description: AAA_10 Location: 87940-88696 bp Feature: gene Location: 88814-89296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), E1_enzyme_family (cl22428), DUF3854 (pfam12965), GIIM (pfam08388), Replic_Relax (pfam13814), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287), TraC-F-type (TIGR02746)
AAA_10 (pfam12846)