myRT

myRT report for GCA_012395585.1_ASM1239558v1

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Seq: JAAZSZ010000018.1 Alteromonadaceae bacterium A_SAG1 AH-205-J07_NODE_19, whole genome shotgun sequence (53509 bp)
Overview 1 RT 1: 4507-8435 bp Neighborhood of RT #1 [4507, 8452] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 4507-4857 bp Feature: domain Description: TnpB_IS66 Location: 4534-4816 bp Feature: domain Description: TnpB_IS66 Location: 4534-481 6 bp Feature: gene Location: 4944-5987 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5025-5217 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5025-521 7 bp Feature: domain Description: zf-IS66 Location: 5241-5373 bp Feature: domain Description: zf-IS66 Location: 5241 -5373 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5433-5874 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5433-5874 bp Feature: gene Location: 5992-7386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6352-7036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6352-7036 bp Feature: gene Location: 7425-7631 bp Feature: gene Location: 7928-8452 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7955-8306 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7955-8306 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8327-8435 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8327-8435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, DDE_Tnp_IS66_C (pfam13817)

Seq: JAAZSZ010000025.1 Alteromonadaceae bacterium A_SAG1 AH-205-J07_NODE_26, whole genome shotgun sequence (47216 bp)
Overview 1 RT 1: 44120-47043 bp Neighborhood of RT #1 [44120, 47213] TonB-siderophor PRK10044 RVT-GII GIIM Feature: gene Location: 44120-44434 bp Feature: domain Description: TonB-siderophor Location: 44135-44432 bp Feature: domain Description: TonB-siderophor Location: 44135-44432 bp Feature: gene Location: 44379-46283 bp Feature: domain Description: PRK10044 Location: 44406-46158 bp Feature: domain Description: PRK10044 Location: 44406-46158 bp Feature: gene Location: 46569-47213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46572-46770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46572 -46770 bp Feature: domain Description: GIIM Note: maturase Location: 46821-47043 bp Feature: domain Description: GIIM Note: maturase Location: 4682 1-47043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PRK10044 (ferrichrome outer membrane transporter; Provisional), RVT-GII, GIIM (pfam08388)

Seq: JAAZSZ010000079.1 Alteromonadaceae bacterium A_SAG1 AH-205-J07_NODE_80, whole genome shotgun sequence (9929 bp)
Overview 1 RT 1: 7412-9927 bp Neighborhood of RT #1 [7412, 9927] RVT-GII GIIM Feature: gene Location: 7412-7651 bp Feature: gene Location: 7742-8017 bp Feature: gene Location: 8104-9453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8383-9016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 83 -9016 bp Feature: domain Description: GIIM Note: maturase Location: 9058-9286 bp Feature: domain Description: GIIM Note: maturase Location: 9058-9286 bp Feature: gene Location: 9538-9927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAZSZ010000095.1 Alteromonadaceae bacterium A_SAG1 AH-205-J07_NODE_96, whole genome shotgun sequence (4955 bp)
Overview 1 RT 1: 2160-4943 bp Neighborhood of RT #1 [2160, 4954] AhpF RVT-GII Feature: gene Location: 2160-3749 bp Feature: domain Description: AhpF Location: 2163-3708 bp Feature: domain Description: AhpF Location: 2163-3708 bp Feature: gene Location: 4114-4311 bp Feature: gene Location: 4550-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4763-4943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 763-4 94 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AhpF (TIGR03140), RVT-GII