myRT

myRT report for GCA_012395905.1_ASM1239590v1

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Seq: JAAWXG010000023.1 Klebsiella oxytoca strain 18099069b contig00023, whole genome shotgun sequence (94826 bp)
Overview 1 RT 1: 61804-67546 bp Neighborhood of RT #1 [61804, 67548] Inovirus_Gp2 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 61804-62484 bp Feature: domain Description: Inovirus_Gp2 Location: 61918-62470 bp Feature: domain Description: Inovirus_Gp2 Location: 61 91 8-62470 bp Feature: gene Location: 63324-64910 bp Feature: domain Description: COG3950 Location: 63504-64719 bp Feature: domain Description: COG3950 Location: 63504-6471 9 bp Feature: gene Location: 64891-65853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64999-65596 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64999-65596 bp Feature: gene Location: 65881-66036 bp Feature: gene Location: 66307-67548 bp Feature: domain Description: PRK09692 Location: 66310-67546 bp Feature: domain Description: PRK09692 Location: 6631 0-67546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inovirus_Gp2 (pfam11726), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: JAAWXG010000029.1 Klebsiella oxytoca strain 18099069b contig00029, whole genome shotgun sequence (50446 bp)
Overview 1 RT 1: 32285-35591 bp Neighborhood of RT #1 [32285, 35704] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 32285-32563 bp Feature: domain Description: InsE Location: 32297-32555 bp Feature: domain Description: InsE Location: 32 2 97-32 555 bp Feature: gene Location: 32620-33030 bp Feature: domain Description: PHA02517 Location: 32626-32965 bp Feature: domain Description: PHA02 517 Location: 32 62 6-32 965 bp Feature: gene Location: 33331-34086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33439-33568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33439-33568 bp Feature: domain Description: GIIM Note: maturase Location: 33682-33862 bp Feature: domain Description: GIIM Note: maturase Location: 33682 -33862 bp Feature: gene Location: 34209-34409 bp Feature: domain Description: PHA02517 Location: 34212-34374 bp Feature: domain Description: PHA02 517 Location: 342 12 -34374 bp Feature: gene Location: 34628-35704 bp Feature: domain Description: COG3547 Location: 34667-35591 bp Feature: domain Description: COG3547 Location: 34667-35591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )