myRT

myRT report for GCA_012396055.1_ASM1239605v1

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Seq: JAAXOS010000039.1 Nocardia gamkensis strain DSM 44956 W9743_39, whole genome shotgun sequence (5399 bp)
Overview 1 RT 1: 1366-4414 bp Neighborhood of RT #1 [1366, 4488] rve_3 Tra5 RVT-GII GIIM PHA02517 Feature: gene Location: 1366-1992 bp Feature: domain Description: rve_3 Location: 1789-1948 bp Feature: domain Description: rve_3 Location: 1 789-1 948 bp Feature: gene Location: 1572-1925 bp Feature: domain Description: Tra5 Location: 1596-1923 bp Feature: domain Description: Tra5 Location: 1 596-1 923 bp Feature: gene Location: 1947-3398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262-2949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2262-2949 bp Feature: domain Description: GIIM Note: maturase Location: 3024-3252 bp Feature: domain Description: GIIM Note: maturase Location: 3024-3252 bp Feature: gene Location: 3590-3895 bp Feature: gene Location: 3928-4488 bp Feature: domain Description: PHA02517 Location: 4078-4414 bp Feature: domain Description: PHA0251 7 Location: 4078-441 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)