myRT

myRT report for GCA_012511845.1_ASM1251184v1

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Seq: JAAZFF010000336.1 Lentisphaerae bacterium isolate AS10tlH2TH_180 282823_AS10, whole genome shotgun sequence (4275 bp)
Overview 1 RT 1: 2952-4125 bp Neighborhood of RT #1 [2952, 4274] RVT-GII Feature: gene Location: 2952-3134 bp Feature: gene Location: 3268-3624 bp Feature: gene Location: 3642-4274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3888-4125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3888-41 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAZFF010000063.1 Lentisphaerae bacterium isolate AS10tlH2TH_180 48037_AS10, whole genome shotgun sequence (9001 bp)
Overview 1 RT 1: 1012-6885 bp Neighborhood of RT #1 [1012, 6908] pfam03781 RVT-DGRs HRDC STKc_PknB_like CarboxypepD_reg PEGA YfmG Feature: gene Location: 1012-1497 bp Feature: gene Location: 1870-2214 bp Feature: domain Description: pfam03781 Location: 1885-1999 bp Feature: domain Description: pfam03781 Location: 1885-1999 bp Feature: gene Location: 2202-3194 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2403-2988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 403-2 988 bp Feature: gene Location: 3200-3697 bp Feature: domain Description: HRDC Location: 3431-3626 bp Feature: domain Description: HRDC Location: 3431-362 6 bp Feature: gene Location: 3870-6908 bp Feature: domain Description: STKc_PknB_like Location: 3891-4836 bp Feature: domain Description: STKc_PknB_like Location: 3891-4836 bp Feature: domain Description: CarboxypepD_reg Location: 5286-5481 bp Feature: domain Description: CarboxypepD_reg Location: 52 86-5481 bp Feature: domain Description: PEGA Location: 5538-5652 bp Feature: domain Description: PEGA Location: 5538-5652 bp Feature: domain Description: YfmG Location: 6213-6885 bp Feature: domain Description: YfmG Location: 62 13-6885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, HRDC (smart00341), STKc_PknB_like (cd14014), CarboxypepD_reg (pfam13620), PEGA (pfam08308), YfmG (COG1262)

Seq: JAAZFF010000069.1 Lentisphaerae bacterium isolate AS10tlH2TH_180 52441_AS10, whole genome shotgun sequence (20298 bp)
Overview 1 RT 1: 2-6510 bp Neighborhood of RT #1 [2, 6578] RVT-GII LTD Fn3_assoc pfam08757 LTD BcsQ Feature: gene Location: 2-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-176 bp Feature: gene Location: 943-5733 bp Feature: domain Description: LTD Location: 997-1321 bp Feature: domain Description: LTD Location: 997-13 21 bp Feature: domain Description: Fn3_assoc Location: 2566-2722 bp Feature: domain Description: Fn3 _assoc Location: 2566-2722 bp Feature: domain Description: pfam08757 Location: 3040-4099 bp Feature: domain Description: pfam08757 Location: 3 040-4099 bp Feature: domain Description: LTD Location: 5002-5347 bp Feature: domain Description: LTD Location: 5002-53 47 bp Feature: gene Location: 5748-6578 bp Feature: domain Description: BcsQ Location: 5751-6510 bp Feature: domain Description: BcsQ Location: 5751-6510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LTD (pfam00932), Fn3_assoc (pfam13287), pfam08757 (CotH;CotH kinase protein), BcsQ (COG1192)