myRT

myRT report for GCA_012513915.1_ASM1251391v1

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Seq: JAAZBG010000161.1 Fibrobacter sp. isolate AS06rmzACSIP_529 443364_AS06, whole genome shotgun sequence (13996 bp)
Overview 1 RT 1: 9143-12159 bp Neighborhood of RT #1 [9143, 12221] YcjD PolY RVT-GII DUF4276 Feature: gene Location: 9143-9619 bp Feature: domain Description: YcjD Location: 9161-9509 bp Feature: domain Description: YcjD Location: 91 61 -9509 bp Feature: gene Location: 9741-10988 bp Feature: domain Description: PolY Location: 9762-10746 bp Feature: domain Description: PolY Location: 9762-1 0746 bp Feature: gene Location: 10992-11147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11007-11097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 007-1 1 097 bp Feature: gene Location: 11174-11311 bp Feature: gene Location: 11493-12221 bp Feature: domain Description: DUF4276 Location: 11523-12159 bp Feature: domain Description: DUF4276 Location: 1 1 523-1 21 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcjD (COG2852), PolY (cl28996), RVT-GII, DUF4276 (pfam14103)

Seq: JAAZBG010000278.1 Fibrobacter sp. isolate AS06rmzACSIP_529 669699_AS06, whole genome shotgun sequence (27923 bp)
Overview 1 RT 1: 18625-24611 bp Neighborhood of RT #1 [18625, 24616] COG2865 RVT-GII CarboxypepD_reg MTES_1575 Feature: gene Location: 18625-18855 bp Feature: gene Location: 19471-20100 bp Feature: domain Description: COG2865 Location: 19540-20086 bp Feature: domain Description: COG2 865 Location: 19540-2 0086 bp Feature: gene Location: 20695-22032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21001-21679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1001-2 1679 bp Feature: gene Location: 22371-24113 bp Feature: domain Description: CarboxypepD_reg Location: 22449-22566 bp Feature: domain Description: CarboxypepD_reg Location: 2 2 449-2 2 566 bp Feature: gene Location: 24275-24616 bp Feature: domain Description: MTES_1575 Location: 24401-24611 bp Feature: domain Description: MTES_1575 Location: 2 4401-2 4611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, CarboxypepD_reg (pfam13620), MTES_1575 (pfam18741)

Seq: JAAZBG010000027.1 Fibrobacter sp. isolate AS06rmzACSIP_529 77671_AS06, whole genome shotgun sequence (14966 bp)
Overview 1 RT 1: 2-4935 bp Neighborhood of RT #1 [2, 5120] RVT-UG5 nitrilase DNA_processg_A Peptidase_M78 Feature: gene Location: 2-820 bp Feature: gene Location: 817-3711 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1315-1774 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 15-1774 bp Feature: domain Description: nitrilase Location: 2905-3577 bp Feature: domain Description: nitrilase Location: 2905-3 577 bp Feature: gene Location: 3711-4184 bp Feature: domain Description: DNA_processg_A Location: 3729-4104 bp Feature: domain Description: DNA_processg_A Location: 3 729-4104 bp Feature: gene Location: 4242-5120 bp Feature: domain Description: Peptidase_M78 Location: 4764-4935 bp Feature: domain Description: Peptidase_M78 Location: 4764-493 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), DNA_processg_A (pfam02481), Peptidase_M78 (pfam06114)