myRT

myRT report for GCA_012515235.1_ASM1251523v1

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Seq: JAAYYU010000100.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 132904_AS06, whole genome shotgun sequence (21748 bp)
Overview 1 RT 1: 3963-6209 bp Neighborhood of RT #1 [3963, 6209] RVT-GII Cas2_I_II_III Feature: gene Location: 3963-5345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4263-4899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4263-4899 bp Feature: gene Location: 5697-6008 bp Feature: domain Description: Cas2_I_II_III Location: 5706-5901 bp Feature: domain Description: Cas2_I_II_III Location: 5706-5901 bp Feature: gene Location: 5727-6209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cas2_I_II_III (cl11442)

Seq: JAAYYU010000014.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 15649_AS06, whole genome shotgun sequence (39984 bp)
Overview 1 RT 1: 31842-38642 bp Neighborhood of RT #1 [31842, 38695] MPP_1 COG5635 YfmG Avd_like RVT-DGRs TIR_2 YpfH Peptidase_S9 Feature: gene Location: 31842-35360 bp Feature: domain Description: MPP_1 Location: 31863-32646 bp Feature: domain Description: MPP_1 Location: 31863-32 646 bp Feature: domain Description: COG5635 Location: 33255-34416 bp Feature: domain Description: COG5635 Location: 332 55-34416 bp Feature: domain Description: YfmG Location: 34686-35355 bp Feature: domain Description: YfmG Location: 34686-35355 bp Feature: gene Location: 35840-36217 bp Feature: domain Description: Avd_like Location: 35876-36179 bp Feature: domain Description: Avd_like Location: 35876-36179 bp Feature: gene Location: 36090-36776 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36156-36456 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36156-36456 bp Feature: gene Location: 37118-37756 bp Feature: domain Description: TIR_2 Location: 37136-37532 bp Feature: domain Description: TIR_2 Location: 37136-37532 bp Feature: gene Location: 37868-38695 bp Feature: domain Description: YpfH Location: 38033-38180 bp Feature: domain Description: YpfH Location: 38033-38180 bp Feature: domain Description: Peptidase_S9 Location: 38219-38642 bp Feature: domain Description: Peptidase_S9 Location: 382 19-38642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_1 (cd07400), COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, TIR_2 (pfam13676), YpfH (COG0400), Peptidase_S9 (pfam00326)

Seq: JAAYYU010000019.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 22246_AS06, whole genome shotgun sequence (71057 bp)
Overview 1 RT 1: 63440-70478 bp Neighborhood of RT #1 [63440, 70690] PD40 PD40 PD40 TPR TPR_2 TPR NACHT COG5635 YfmG RVT-DGRs Feature: gene Location: 63440-65788 bp Feature: domain Description: PD40 Location: 64376-64421 bp Feature: domain Description: PD40 Location: 643 76-64421 bp Feature: domain Description: PD40 Location: 64601-64670 bp Feature: domain Description: PD40 Location: 64601-64670 bp Feature: domain Description: PD40 Location: 64739-64826 bp Feature: domain Description: PD40 Location: 6473 9-64826 bp Feature: domain Description: TPR Location: 65006-65270 bp Feature: domain Description: TPR Location: 65006-65270 bp Feature: domain Description: TPR_2 Location: 65291-65387 bp Feature: domain Description: TPR_2 Location: 65291-653 87 bp Feature: domain Description: TPR Location: 65393-65693 bp Feature: domain Description: TPR Location: 653 93 -65693 bp Feature: gene Location: 65838-69149 bp Feature: domain Description: NACHT Location: 66984-67248 bp Feature: domain Description: NACHT Location: 66984-67248 bp Feature: domain Description: COG5635 Location: 67677-67872 bp Feature: domain Description: COG563 5 Location: 67677-67872 bp Feature: domain Description: YfmG Location: 68280-68910 bp Feature: domain Description: YfmG Location: 68280-68910 bp Feature: gene Location: 69626-70690 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69836-70478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6983 6-70478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PD40 (pfam07676), TPR (smart00028), TPR_2 (pfam07719), NACHT (pfam05729), COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), RVT-DGRs

Seq: JAAYYU010000322.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 479449_AS06, whole genome shotgun sequence (33805 bp)
Overview 1 RT 1: 21905-26757 bp Neighborhood of RT #1 [21905, 26807] DUF1080 DUF1080 ThuA RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 21905-23281 bp Feature: domain Description: DUF1080 Location: 22016-22619 bp Feature: domain Description: DUF1080 Location: 22016-22619 bp Feature: domain Description: DUF1080 Location: 22676-23228 bp Feature: domain Description: DUF1080 Location: 22676-23228 bp Feature: gene Location: 23537-24499 bp Feature: domain Description: ThuA Location: 23801-24359 bp Feature: domain Description: ThuA Location: 23801-24 359 bp Feature: gene Location: 24760-25941 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24991-25597 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24 991-25597 bp Feature: gene Location: 26003-26431 bp Feature: domain Description: Cas1_I-II-III Location: 26015-26366 bp Feature: domain Description: Cas1_I-II-III Location: 26015-26366 bp Feature: gene Location: 26532-26807 bp Feature: domain Description: Cas2_I_II_III Location: 26541-26757 bp Feature: domain Description: Cas2_I_II_III Location: 2654 1-26757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1080 (pfam06439), ThuA (pfam06283), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: JAAYYU010000035.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 50398_AS06, whole genome shotgun sequence (176398 bp)
Overview 1 RT 1: 2255-6271 bp Neighborhood of RT #1 [2255, 6513] dnstrm_HI1420 COG2929 RVT-GII GIIM W_rSAM_matur Feature: gene Location: 2255-2572 bp Feature: domain Description: dnstrm_HI1420 Location: 2300-2561 bp Feature: domain Description: dnstrm_HI1420 Location: 2300-25 61 bp Feature: gene Location: 3643-3915 bp Feature: domain Description: COG2929 Location: 3646-3910 bp Feature: domain Description: COG2929 Location: 3646-3910 bp Feature: gene Location: 4421-4987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4430-4709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4430-4709 bp Feature: domain Description: GIIM Note: maturase Location: 4760-4892 bp Feature: domain Description: GIIM Note: maturase Location: 4760-4892 bp Feature: gene Location: 5073-5528 bp Feature: gene Location: 5719-6513 bp Feature: domain Description: W_rSAM_matur Location: 5833-6271 bp Feature: domain Description: W_rSAM_matur Location: 5 833-6271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnstrm_HI1420 (TIGR02684), COG2929 (Uncharacterized conserved protein, DUF497 family ), RVT-GII, GIIM (pfam08388), W_rSAM_matur (TIGR04317)

Seq: JAAYYU010000389.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 674721_AS06, whole genome shotgun sequence (50013 bp)
Overview 1 RT 1: 19756-22470 bp Neighborhood of RT #1 [19756, 22820] RelE RVT-GII Methyltransf_11 Feature: gene Location: 19756-20049 bp Feature: domain Description: RelE Location: 19759-20005 bp Feature: domain Description: RelE Location: 19759-20005 bp Feature: gene Location: 20046-20309 bp Feature: gene Location: 20395-20730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20416-20623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20416 -206 23 bp Feature: gene Location: 21454-21825 bp Feature: gene Location: 22005-22820 bp Feature: domain Description: Methyltransf_11 Location: 22188-22470 bp Feature: domain Description: Methyltransf_11 Location: 22188-22470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), RVT-GII, Methyltransf_11 (pfam08241)

Seq: JAAYYU010000044.1 Candidatus Anammoximicrobium sp. isolate AS06rmzACSIP_251 71067_AS06, whole genome shotgun sequence (6357 bp)
Overview 1 RT 1: 1-5725 bp Neighborhood of RT #1 [1, 5739] RVT-DGRs HRDC STKc_PknB_like YfmG Feature: gene Location: 1-618 bp Feature: gene Location: 762-1202 bp Feature: gene Location: 1505-2503 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1715-2315 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17 15-2315 bp Feature: gene Location: 2500-3012 bp Feature: domain Description: HRDC Location: 2752-2938 bp Feature: domain Description: HRDC Location: 27 52-2938 bp Feature: gene Location: 3307-5739 bp Feature: domain Description: STKc_PknB_like Location: 3547-4336 bp Feature: domain Description: STKc_PknB_like Location: 3547 -4336 bp Feature: domain Description: YfmG Location: 4957-5725 bp Feature: domain Description: YfmG Location: 4957 -57 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HRDC (smart00341), STKc_PknB_like (cd14014), YfmG (COG1262)