myRT

myRT report for GCA_012517405.1_ASM1251740v1

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Seq: JAAYVB010000027.1 Propionibacterium sp. isolate AS27yjCOA_218 107720_AS27, whole genome shotgun sequence (33161 bp)
Overview 1 RT 1: 18707-22422 bp Neighborhood of RT #1 [18707, 22422] DDE_Tnp_1 RVT-GII GIIM RVT-GII Feature: gene Location: 18707-19591 bp Feature: domain Description: DDE_Tnp_1 Location: 18725-19376 bp Feature: domain Description: DDE_Tnp_1 Location: 1 8725-1 9376 bp Feature: gene Location: 19425-19706 bp Feature: gene Location: 19820-20422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19823-19988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9823-1 9988 bp Feature: domain Description: GIIM Note: maturase Location: 20063-20282 bp Feature: domain Description: GIIM Note: maturase Location: 20063-20282 bp Feature: gene Location: 20457-21263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20775-21189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20775-21 1 89 bp Feature: gene Location: 21229-21531 bp Feature: gene Location: 21790-22422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: JAAYVB010000029.1 Propionibacterium sp. isolate AS27yjCOA_218 175290_AS27, whole genome shotgun sequence (2535 bp)
Overview 1 RT 1: 198-2225 bp Neighborhood of RT #1 [198, 2260] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 198-1988 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 348-939 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 348-939 bp Feature: domain Description: Cas1_I-II-III Location: 1002-1947 bp Feature: domain Description: Cas1_I-II-III Location: 1002 -1947 bp Feature: gene Location: 1979-2260 bp Feature: domain Description: Cas2_I_II_III Location: 1994-2225 bp Feature: domain Description: Cas2 _I_II_III Location: 1994-2 2 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)