myRT

myRT report for GCA_012518645.1_ASM1251864v1

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Seq: JAAYRS010000017.1 Firmicutes bacterium isolate AS23ysBPME_23 17077_AS23, whole genome shotgun sequence (5486 bp)
Overview 1 RT 1: 2954-5460 bp Neighborhood of RT #1 [2954, 5477] BaeS RVT-GII RVT-CRISPR-like Feature: gene Location: 2954-4306 bp Feature: domain Description: BaeS Location: 3173-4295 bp Feature: domain Description: BaeS Location: 31 73-4295 bp Feature: gene Location: 4464-4682 bp Feature: gene Location: 4817-5032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4937-5021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4937-5021 bp Feature: gene Location: 5343-5477 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5346-5460 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5346-5460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, RVT-CRISPR

Seq: JAAYRS010000023.1 Firmicutes bacterium isolate AS23ysBPME_23 23639_AS23, whole genome shotgun sequence (9257 bp)
Overview 1 RT 1: 1174-3215 bp Neighborhood of RT #1 [1174, 3215] RVT-CRISPR-like Feature: gene Location: 1174-1620 bp Feature: gene Location: 1698-2087 bp Feature: gene Location: 2344-2499 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2383-2476 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 383-2 476 bp Feature: gene Location: 2503-2739 bp Feature: gene Location: 3075-3215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JAAYRS010000153.1 Firmicutes bacterium isolate AS23ysBPME_23 239568_AS23, whole genome shotgun sequence (3245 bp)
Overview 1 RT 1: 1618-3053 bp Neighborhood of RT #1 [1618, 3109] DUF2089 RVT-GII Feature: gene Location: 1618-2046 bp Feature: domain Description: DUF2089 Location: 1696-2041 bp Feature: domain Description: DUF2089 Location: 1696-2041 bp Feature: gene Location: 2359-2652 bp Feature: gene Location: 2924-3109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927-3053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927-3 053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2089 (pfam09862), RVT-GII

Seq: JAAYRS010000202.1 Firmicutes bacterium isolate AS23ysBPME_23 302938_AS23, whole genome shotgun sequence (26496 bp)
Overview 1 RT 1: 21460-25253 bp Neighborhood of RT #1 [21460, 25253] COG3976 COG3976 RVT-GII PRK05472 Feature: gene Location: 21460-21609 bp Feature: gene Location: 21938-22630 bp Feature: domain Description: COG3976 Location: 21983-22295 bp Feature: domain Description: COG3976 Location: 21983-22295 bp Feature: domain Description: COG3976 Location: 22544-22622 bp Feature: domain Description: COG3976 Location: 2254 4 -22622 bp Feature: gene Location: 23496-23867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23559-23853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23559-23853 bp Feature: gene Location: 24030-24695 bp Feature: domain Description: PRK05472 Location: 24057-24684 bp Feature: domain Description: PRK054 72 Location: 24 057-24 684 bp Feature: gene Location: 24780-25253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3976 (Uncharacterized protein, contains FMN-binding domain ), RVT-GII, PRK05472 (redox-sensing transcriptional repressor Rex; Provisional)