myRT

myRT report for GCA_012519925.1_ASM1251992v1

Download annotations/find similar RTs

Seq: JAAYPF010000181.1 Clostridiaceae bacterium isolate AS22ysBPME_170 165198_AS22, whole genome shotgun sequence (56105 bp)
Overview 1 RT 1: 324-4214 bp Neighborhood of RT #1 [324, 4234] RVT-GII PRK07726 PGRP M14_Endopeptidase_I Feature: gene Location: 324-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477-540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477-540 bp Feature: gene Location: 878-2854 bp Feature: domain Description: PRK07726 Location: 887-2813 bp Feature: domain Description: PRK07726 Location: 887-281 3 bp Feature: gene Location: 2963-4234 bp Feature: domain Description: PGRP Location: 2978-3224 bp Feature: domain Description: PGRP Location: 2978-3224 bp Feature: domain Description: M14_Endopeptidase_I Location: 3488-4214 bp Feature: domain Description: M1 4_Endopeptidase_I Location: 3488-421 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK07726 (DNA topoisomerase 3), PGRP (smart00701), M14_Endopeptidase_I (cd06229)

Seq: JAAYPF010000241.1 Clostridiaceae bacterium isolate AS22ysBPME_170 232749_AS22, whole genome shotgun sequence (12932 bp)
Overview 1 RT 1: 5619-10775 bp Neighborhood of RT #1 [5619, 10775] Acetyltransf_1 RVT-UG26 COG5421 Feature: gene Location: 5619-6641 bp Feature: domain Description: Acetyltransf_1 Location: 6225-6537 bp Feature: domain Description: Acetyltransf_1 Location: 62 2 5-6537 bp Feature: gene Location: 6625-7599 bp Feature: gene Location: 7935-9152 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 8133-8751 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 8133-8751 bp Feature: gene Location: 9402-10397 bp Feature: domain Description: COG5421 Location: 9609-10152 bp Feature: domain Description: COG542 1 Location: 9609-10152 bp Feature: gene Location: 10536-10775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-UG26, COG5421 (Transposase )

Seq: JAAYPF010000244.1 Clostridiaceae bacterium isolate AS22ysBPME_170 235414_AS22, whole genome shotgun sequence (4616 bp)
Overview 1 RT 1: 1-3347 bp Neighborhood of RT #1 [1, 3347] RVT-GII RVT-GII GIIM Feature: gene Location: 1-156 bp Feature: gene Location: 248-490 bp Feature: gene Location: 861-1595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1593 bp Feature: gene Location: 1608-2153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1674-1863 bp Feature: domain Description: GIIM Note: maturase Location: 1968-2130 bp Feature: domain Description: GIIM Note: maturase Location: 1968-213 0 bp Feature: gene Location: 2187-2729 bp Feature: gene Location: 3087-3347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)