myRT

myRT report for GCA_012520405.1_ASM1252040v1

Download annotations/find similar RTs

Seq: JAAYOJ010000012.1 Peptococcaceae bacterium isolate AS21ysBPME_346 108396_AS21, whole genome shotgun sequence (3767 bp)
Overview 1 RT 1: 2-3762 bp Neighborhood of RT #1 [2, 3764] RVT-GII GIIM HTH_XRE HTH_19 HsdM Feature: gene Location: 2-130 bp Feature: gene Location: 208-1632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 -1 1 86 bp Feature: domain Description: GIIM Note: maturase Location: 1243-1471 bp Feature: domain Description: GIIM Note: maturase Location: 1 243-1 471 bp Feature: gene Location: 1821-2414 bp Feature: domain Description: HTH_XRE Location: 1869-1995 bp Feature: domain Description: HTH_XRE Location: 1 869-1 995 bp Feature: domain Description: HTH_19 Location: 2256-2358 bp Feature: domain Description: HTH_1 9 Location: 2256-2358 bp Feature: gene Location: 2424-3764 bp Feature: domain Description: HsdM Location: 2514-3762 bp Feature: domain Description: HsdM Location: 251 4-3762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), HTH_19 (pfam12844), HsdM (COG0286)

Seq: JAAYOJ010000046.1 Peptococcaceae bacterium isolate AS21ysBPME_346 204906_AS21, whole genome shotgun sequence (2360 bp)
Overview 1 RT 1: 301-1674 bp Neighborhood of RT #1 [301, 2357] zf-C4_Topoisom zf-C4_Topoisom RVT-UG19 Feature: gene Location: 301-477 bp Feature: gene Location: 546-818 bp Feature: domain Description: zf-C4_Topoisom Location: 567-636 bp Feature: domain Description: zf-C4_Topoisom Location: 567-636 bp Feature: domain Description: zf-C4_Topoisom Location: 639-750 bp Feature: domain Description: zf-C4_Topoisom Location: 639-750 bp Feature: gene Location: 828-2357 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1221-1674 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 12 2 1-1674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-C4_Topoisom (pfam01396), RVT-UG19