myRT

myRT report for GCA_012521795.1_ASM1252179v1

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Seq: JAAYLP010000299.1 Syntrophomonadaceae bacterium isolate AS15tlH2ME_52 193708_AS15, whole genome shotgun sequence (8017 bp)
Overview 1 RT 1: 3-2516 bp Neighborhood of RT #1 [3, 2704] RVT-GII GIIM DacC Feature: gene Location: 3-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-99 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24-99 bp Feature: domain Description: GIIM Note: maturase Location: 150-381 bp Feature: domain Description: GIIM Note: maturase Location: 1 50-381 bp Feature: gene Location: 751-1212 bp Feature: gene Location: 1439-2704 bp Feature: domain Description: DacC Location: 1469-2516 bp Feature: domain Description: DacC Location: 1 469-251 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DacC (COG1686)

Seq: JAAYLP010000077.1 Syntrophomonadaceae bacterium isolate AS15tlH2ME_52 33341_AS15, whole genome shotgun sequence (3934 bp)
Overview 1 RT 1: 268-2631 bp Neighborhood of RT #1 [268, 2771] RVT-GII GIIM COG5421 Feature: gene Location: 268-1590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1150 bp Feature: domain Description: GIIM Note: maturase Location: 1204-1435 bp Feature: domain Description: GIIM Note: maturase Location: 12 04-1435 bp Feature: gene Location: 1600-1806 bp Feature: gene Location: 2025-2771 bp Feature: domain Description: COG5421 Location: 2193-2631 bp Feature: domain Description: COG542 1 Location: 2 193-2 631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase )

Seq: JAAYLP010000170.1 Syntrophomonadaceae bacterium isolate AS15tlH2ME_52 81256_AS15, whole genome shotgun sequence (6993 bp)
Overview 1 RT 1: 3698-6984 bp Neighborhood of RT #1 [3698, 6992] ExoD RVT-GII RVT-GII group_II_RT_mat Feature: gene Location: 3698-4129 bp Feature: gene Location: 4257-4874 bp Feature: domain Description: ExoD Location: 4293-4812 bp Feature: domain Description: ExoD Location: 4293 -4812 bp Feature: gene Location: 5940-6548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6240-6537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6240-653 7 bp Feature: gene Location: 6568-6831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6571-6823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6571-6823 bp Feature: gene Location: 6834-6992 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6849-6984 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6849-6984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ExoD (pfam06055), RVT-GII, group_II_RT_mat (TIGR04416)